Fish Single-cell RNA Database

GENE ID: ENSDARG00000095906

Symbol	Location	Gene type	Genome version	Species
CR848047.1	16: 29212421 ~ 29227002 (+)	lincRNA	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	Retinal progenitors (cluster: 1) Muller glia cells (cluster: 9)	potential marker potential marker	NA NA
	GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment	Bipolar cells (cluster: 2)	potential marker	NA
	GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment	Retinal progenitors (cluster: 3) Retinal progenitors (cluster: 3)	potential marker potential marker	NA NA
	GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Brain ventricular zone cells (cluster: 17)	potential marker	NA
	GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant
	GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
	GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)
	GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
	GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
	GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
	GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
	GSE158099 (runx1 -\|-)	whole body	hematopoietic	6dpf, cd41:GFPlow-runx1-/-
	GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
	GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
	GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.