Fish Single-cell RNA Database

GENE ID: ENSDARG00000056723

Symbol	Location	Gene type	Genome version	Species
fhad1	8: 21383347 ~ 21393457 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000056723 (fhad1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000012435	spic	4: 17807837 ~ 17812131 (-)
ENSDARG00000102226	gpr19	4: 128697 ~ 133492 (-)
ENSDARG00000077314	mblac1	7: 26459360 ~ 26467404 (-)
ENSDARG00000058508	cfap70	3: 11977271 ~ 12026741 (-)
ENSDARG00000074094	tgm2b	6: 2093206 ~ 2122486 (+)
ENSDARG00000055857	dop1b	9: 33154841 ~ 33195586 (+)
ENSDARG00000019962	dop1a	16: 33062570 ~ 33097398 (-)
ENSDARG00000056723	fhad1	8: 21383347 ~ 21393457 (+)
ENSDARG00000068575	tmem51a	8: 26701038 ~ 26709959 (-)
ENSDARG00000061585	cyp4v7	14: 29975268 ~ 29990757 (+)
ENSDARG00000069150	rit1	19: 24039830 ~ 24065522 (+)
ENSDARG00000012040	rnf19a	19: 12030832 ~ 12078583 (-)
ENSDARG00000041586	dhx40	15: 17258246 ~ 17285188 (+)
ENSDARG00000075147	lrrc38a	23: 21775436 ~ 21797517 (-)
ENSDARG00000074985	aurkaip1	23: 29883216 ~ 29888793 (+)
ENSDARG00000101270	klhl8	21: 170038 ~ 179101 (+)
ENSDARG00000087745	lrrc38b	11: 28476298 ~ 28514978 (+)
ENSDARG00000061916	tmem51b	11: 25833219 ~ 25853212 (-)
ENSDARG00000031774	pus7	25: 235992 ~ 244424 (+)
ENSDARG00000102793	slc16a6a	KN150708.1: 15753 ~ 31870 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	6dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000056723

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences