Fish Single-cell RNA Database

GENE ID: ENSDARG00000105099

Symbol	Location	Gene type	Genome version	Species
golga7bb	13: 40019001 ~ 40061830 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000105099 (golga7bb), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000018508	zdhhc8b	5: 17881074 ~ 18007077 (-)
ENSDARG00000029039	zdhhc23a	5: 24282570 ~ 24294160 (+)
ENSDARG00000062511	golga3	5: 18965494 ~ 19006290 (-)
ENSDARG00000070618	tatdn2	6: 40439858 ~ 40449399 (-)
ENSDARG00000016263	zdhhc5a	1: 44523516 ~ 44566433 (+)
ENSDARG00000052386	cldnd1b	1: 52481332 ~ 52486995 (+)
ENSDARG00000014333	ormdl1	9: 41024973 ~ 41034174 (+)
ENSDARG00000071203	sptssa	17: 9944495 ~ 9950911 (-)
ENSDARG00000060515	zdhhc9	14: 33525196 ~ 33567334 (+)
ENSDARG00000087417	zdhhc5b	14: 49007501 ~ 49031982 (+)
ENSDARG00000059843	fam135a	13: 39182099 ~ 39228382 (+)
ENSDARG00000105099	golga7bb	13: 40019001 ~ 40061830 (+)
ENSDARG00000091658	sptssb	15: 1679962 ~ 1687204 (-)
ENSDARG00000070222	fam43b	23: 37323962 ~ 37325961 (+)
ENSDARG00000035333	mis18a	10: 33588715 ~ 33594110 (+)
ENSDARG00000045927	slc25a44a	25: 6266009 ~ 6275207 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	NA	NA	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000105099

EXPRESSION

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