Fish Single-cell RNA Database

GENE ID: ENSDARG00000057728

Symbol	Location	Gene type	Genome version	Species
slc17a8	18: 15616167 ~ 15635407 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000057728 (slc17a8), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000022424	slc26a5	4: 14932537 ~ 14954327 (-)
ENSDARG00000023394	slc37a2	5: 58455488 ~ 58483036 (+)
ENSDARG00000059775	slc32a1	6: 60142619 ~ 60147517 (-)
ENSDARG00000086104	slco5a1a	2: 42382472 ~ 42415902 (-)
ENSDARG00000018534	slc6a9	2: 33335911 ~ 33422798 (+)
ENSDARG00000062854	sdk1b	1: 11124746 ~ 11519934 (-)
ENSDARG00000074254	abcb6b	9: 14202686 ~ 14273652 (-)
ENSDARG00000030832	otofa	20: 31076488 ~ 31212556 (+)
ENSDARG00000077367	ntng2a	8: 11993150 ~ 12111461 (+)
ENSDARG00000042141	myo6b	17: 36687094 ~ 36842267 (-)
ENSDARG00000020581	otofb	17: 50313650 ~ 50374005 (-)
ENSDARG00000015110	slc18a2	17: 23782324 ~ 23811332 (+)
ENSDARG00000052277	cabp2b	14: 46223458 ~ 46301887 (+)
ENSDARG00000075735	cxxc5b	14: 7932973 ~ 7967428 (+)
ENSDARG00000015854	chata	13: 29406814 ~ 29421331 (-)
ENSDARG00000006356	slc18a3a	13: 29422049 ~ 29424454 (-)
ENSDARG00000091293	dmxl2	18: 39669255 ~ 39787040 (-)
ENSDARG00000057728	slc17a8	18: 15616167 ~ 15635407 (+)
ENSDARG00000062817	crym	12: 10448226 ~ 10462503 (+)
ENSDARG00000060452	sdk2b	12: 37463513 ~ 37734973 (-)
ENSDARG00000107527	slc18a3b	12: 48958913 ~ 48960308 (-)
ENSDARG00000036773	s100s	19: 7595924 ~ 7609286 (+)
ENSDARG00000098057	dscaml1	15: 12071037 ~ 12229874 (-)
ENSDARG00000087100	ntng2b	21: 3979107 ~ 4032650 (-)
ENSDARG00000075698	nkpd1	11: 33284837 ~ 33291898 (+)
ENSDARG00000062471	tafa4b	11: 17596979 ~ 17713987 (-)
ENSDARG00000102773	cacna1da	11: 36793473 ~ 36963988 (-)
ENSDARG00000077596	phf24	10: 17850934 ~ 17926298 (+)
ENSDARG00000015537	gad2	24: 6133147 ~ 6158933 (-)
ENSDARG00000071685	slco5a1a	24: 19591893 ~ 19697446 (+)
ENSDARG00000058015	ano3	25: 35375848 ~ 35468555 (+)
ENSDARG00000045802	hapln3	25: 19201231 ~ 19205875 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
GSE123241 (fgf3 siblings)	neuromast	regeneration	5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000057728

EXPRESSION

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