Fish Single-cell RNA Database

GENE ID: ENSDARG00000010514

Symbol	Location	Gene type	Genome version	Species
cxcr5	18: 43891051 ~ 43894087 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000010514 (cxcr5), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000012435	spic	4: 17807837 ~ 17812131 (-)
ENSDARG00000014657	casp23	7: 19600262 ~ 19604900 (+)
ENSDARG00000058389	ccl19a.1	5: 13353866 ~ 13392962 (+)
ENSDARG00000095747	cxcl11.8	5: 38752287 ~ 38753942 (+)
ENSDARG00000094706	cxcl11.6	5: 42076672 ~ 42077575 (-)
ENSDARG00000075163	cxcl20	5: 42895592 ~ 42904329 (-)
ENSDARG00000069961	il21r.1	3: 45343782 ~ 45361573 (-)
ENSDARG00000070864	bcl6aa	6: 28216487 ~ 28222592 (-)
ENSDARG00000044561	ccr7	6: 10923105 ~ 10927766 (-)
ENSDARG00000055186	ccr9a	2: 32796873 ~ 32799083 (+)
ENSDARG00000105423	cd27	16: 17089114 ~ 17101441 (+)
ENSDARG00000002445	prdm1a	16: 7430998 ~ 7443388 (-)
ENSDARG00000036308	nod1	16: 53710416 ~ 53734405 (+)
ENSDARG00000087474	ccr6a	20: 30610547 ~ 30614519 (+)
ENSDARG00000041919	ccl38.1	20: 39332579 ~ 39333799 (-)
ENSDARG00000041835	ccl38a.5	20: 38279523 ~ 38280392 (+)
ENSDARG00000041917	ccl38a.4	20: 38285671 ~ 38286553 (+)
ENSDARG00000062811	p2ry10	14: 10505464 ~ 10515967 (+)
ENSDARG00000037116	cxcl12a	13: 30804367 ~ 30819715 (+)
ENSDARG00000010514	cxcr5	18: 43891051 ~ 43894087 (+)
ENSDARG00000104691	cd79b	12: 4900981 ~ 4906924 (+)
ENSDARG00000096587	itgam	12: 4147714 ~ 4167750 (+)
ENSDARG00000074772	ccl44	11: 6182680 ~ 6188413 (-)
ENSDARG00000070873	ccl25b	11: 6259048 ~ 6265723 (-)
ENSDARG00000040643	ccr10	24: 36673686 ~ 36680261 (-)
ENSDARG00000094002	ccl34b.4	24: 27416592 ~ 27419198 (-)
ENSDARG00000093098	ccl34b.8	24: 27450085 ~ 27452488 (-)
ENSDARG00000071499	cxcl32b.1	24: 27511734 ~ 27512851 (+)
ENSDARG00000094511	ccl20b	24: 26006730 ~ 26009612 (+)
ENSDARG00000055100	cxcl12b	22: 26929554 ~ 26945493 (-)
ENSDARG00000102945	ccl39.2	25: 13017489 ~ 13029702 (-)
ENSDARG00000096060	ccl39a.10	25: 25202213 ~ 25202523 (+)
ENSDARG00000102519	ccl33.2	25: 12849609 ~ 12851118 (+)
ENSDARG00000070378	ccl35.2	25: 25172983 ~ 25176139 (+)

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
	PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000010514

EXPRESSION

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