Fish Single-cell RNA Database

GENE ID: ENSDARG00000021444

Symbol	Location	Gene type	Genome version	Species
prf1.2	19: 24161712 ~ 24163845 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000021444 (prf1.2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000075720	il2rb	3: 25191366 ~ 25209006 (+)
ENSDARG00000053953	myadml2	3: 57991074 ~ 57991985 (+)
ENSDARG00000076814	gzm3.4	9: 32670526 ~ 32672129 (-)
ENSDARG00000093990	gzm3.3	9: 32667169 ~ 32668928 (-)
ENSDARG00000078451	gzm3	9: 32654554 ~ 32656656 (-)
ENSDARG00000055986	gzm3.2	9: 32657695 ~ 32663496 (-)
ENSDARG00000010619	themis	20: 1423192 ~ 1439256 (-)
ENSDARG00000089202	nkl.3	17: 8879812 ~ 8886735 (-)
ENSDARG00000058673	nkl.1	17: 8896383 ~ 8907682 (-)
ENSDARG00000044023	nkl.4	17: 8854108 ~ 8862424 (-)
ENSDARG00000074160	paqr4b	12: 13164706 ~ 13176918 (+)
ENSDARG00000021444	prf1.2	19: 24161712 ~ 24163845 (-)
ENSDARG00000070702	s100v2	19: 24262263 ~ 24267823 (-)
ENSDARG00000028780	gzmk	21: 19517492 ~ 19520320 (+)
ENSDARG00000090380	gzma	21: 19525141 ~ 19527254 (+)
ENSDARG00000044797	cd8a	21: 11560153 ~ 11563406 (+)
ENSDARG00000068858	il2rga	10: 33544329 ~ 33557299 (-)
ENSDARG00000099401	ccl33.3	25: 12841940 ~ 12844002 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury	NA	NA	NA
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury	NA	NA	NA
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury	NA	NA	NA
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000021444

EXPRESSION

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