Fish Single-cell RNA Database

GENE ID: ENSDARG00000041030

Symbol	Location	Gene type	Genome version	Species
or111-1	15: 31350122 ~ 31352129 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000041030 (or111-1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000096357	ighv3-2	3: 34050922 ~ 34056168 (-)
ENSDARG00000069383	cnga4	9: 32930622 ~ 32946439 (+)
ENSDARG00000117118	taar12e	20: 46060635 ~ 46061650 (-)
ENSDARG00000094548	taar12a	20: 46084808 ~ 46085840 (-)
ENSDARG00000069206	taar15	20: 46206998 ~ 46207984 (+)
ENSDARG00000017437	adcy3b	20: 46651916 ~ 46693942 (+)
ENSDARG00000017853	prepl	13: 10621257 ~ 10647310 (+)
ENSDARG00000105218	ompa	18: 3498989 ~ 3502091 (+)
ENSDARG00000116427	olfcg1	18: 32563554 ~ 32567412 (+)
ENSDARG00000094125	or103-2	15: 31435957 ~ 31438111 (+)
ENSDARG00000004598	or102-2	15: 31466978 ~ 31470101 (+)
ENSDARG00000105721	or128-6	15: 5210468 ~ 5212930 (-)
ENSDARG00000058762	or128-3	15: 5228580 ~ 5230423 (-)
ENSDARG00000054720	or118-1	15: 31311716 ~ 31313932 (-)
ENSDARG00000054719	or118-3	15: 31317358 ~ 31319276 (-)
ENSDARG00000041030	or111-1	15: 31350122 ~ 31352129 (-)
ENSDARG00000086633	or111-3	15: 31364709 ~ 31366742 (-)
ENSDARG00000003344	trpc2b	21: 30746348 ~ 30765533 (+)
ENSDARG00000032380	ompb	21: 22188010 ~ 22189719 (-)
ENSDARG00000044748	or115-12	21: 40225915 ~ 40227326 (+)
ENSDARG00000105792	or115-9	21: 40239192 ~ 40242287 (+)
ENSDARG00000092406	or115-8	21: 40254429 ~ 40256146 (+)
ENSDARG00000068937	si:ch211-218m3.11	21: 40261187 ~ 40263307 (+)
ENSDARG00000053779	si:ch211-218m3.13	21: 40276569 ~ 40279077 (+)
ENSDARG00000044337	or115-6	21: 40280027 ~ 40282140 (+)
ENSDARG00000022319	or115-5	21: 40287100 ~ 40289652 (+)
ENSDARG00000044336	si:ch211-218m3.16	21: 40292801 ~ 40296052 (+)
ENSDARG00000105820	or132-1	21: 25323331 ~ 25325845 (+)
ENSDARG00000078257	ora5	10: 1590604 ~ 1591103 (+)
ENSDARG00000043142	or108-3	10: 36178713 ~ 36180091 (+)
ENSDARG00000068660	or105-1	10: 36345176 ~ 36346363 (+)
ENSDARG00000114718	taar20p	10: 40447708 ~ 40448760 (-)
ENSDARG00000095748	taar18j	10: 40583930 ~ 40584955 (+)
ENSDARG00000112619	si:ch211-238p8.35	10: 40657949 ~ 40658992 (+)
ENSDARG00000116284	taar19l	10: 40660772 ~ 40661767 (+)
ENSDARG00000059315	ora3	22: 381143 ~ 382955 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000041030

EXPRESSION

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