Fish Single-cell RNA Database

GENE ID: ENSDARG00000017340

Symbol	Location	Gene type	Genome version	Species
uts2b	11: 40024182 ~ 40030139 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000017340 (uts2b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000091111	si:ch211-15b10.6	7: 22788718 ~ 22790630 (-)
ENSDARG00000096870	uts2r5	3: 40679931 ~ 40681001 (-)
ENSDARG00000004796	mgrn1b	3: 54849083 ~ 54875874 (+)
ENSDARG00000054026	mustn1a	6: 40841156 ~ 40842768 (-)
ENSDARG00000096322	uts2r4	6: 598669 ~ 599688 (+)
ENSDARG00000091616	prok2	6: 43918529 ~ 43922813 (-)
ENSDARG00000079575	aff3	9: 21490822 ~ 21507083 (-)
ENSDARG00000009473	ppardb	8: 23703464 ~ 23726040 (+)
ENSDARG00000100072	mgrn1a	12: 20122256 ~ 20149558 (+)
ENSDARG00000009624	CABZ01027646.1	12: 28117365 ~ 28181720 (+)
ENSDARG00000070578	edn2	19: 15276713 ~ 15281996 (-)
ENSDARG00000062770	snx21	23: 12428725 ~ 12453700 (-)
ENSDARG00000070353	hoxc13a	23: 36052944 ~ 36055886 (+)
ENSDARG00000070351	hoxc11a	23: 36074798 ~ 36078132 (+)
ENSDARG00000070352	hoxc12a	23: 36063599 ~ 36065182 (+)
ENSDARG00000053854	uts2a	23: 30048849 ~ 30055719 (+)
ENSDARG00000017340	uts2b	11: 40024182 ~ 40030139 (-)
ENSDARG00000102631	hoxc11b	11: 2180072 ~ 2185174 (+)
ENSDARG00000101954	hoxc6b	11: 2198831 ~ 2204754 (+)
ENSDARG00000103133	hoxc12b	11: 2172335 ~ 2175033 (+)
ENSDARG00000089086	mustn1b	11: 18249809 ~ 18253111 (-)
ENSDARG00000113877	hoxc13b	11: 2156430 ~ 2162821 (+)
ENSDARG00000044525	pparda	22: 997838 ~ 1018752 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000017340

EXPRESSION

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