|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
GSE144944 (fgfr3 +|+) |
cranial vault |
baseline |
1mpf, fgfr3 +/+ |
Epidermal cells (cluster: 13)
|
potential marker
|
NA
|
|
PRJNA554650 (6.5dpf) |
brain |
baseline |
6.5dpf, whole brain of nr1d1:VNP fish |
|
|
|
|
GSE144944 (fgfr3 -|-) |
cranial vault |
growth |
1mpf, fgfr3 -/- |
|
|
|
|
GSE173972 (KO, ezh1-|-) |
embryo |
hematopoietic |
1.25dpf, Kdrl-positive embryos |
|
|
|
|
GSE126647 (control) |
embryo |
baseline |
1.17dpf, control nkx2.5:ZsYellow+ cells |
|
|
|
|
GSE126647 (Pbx4-depleted) |
embryo |
growth |
1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells |
|
|
|
|
PRJNA734348 (shield, dnmt1) |
embryo |
growth |
6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) |
|
|
|
|
GSE168695 (5dpf) |
embryo |
baseline |
5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos |
|
|
|
|
PRJNA564810 (5dpf) |
embryo |
baseline |
5dpf, a single-cell transcriptome atlas for zebrafish development |
|
|
|
|
PRJNA564810 (2dpf) |
embryo |
baseline |
2dpf, a single-cell transcriptome atlas for zebrafish development |
|
|
|
|
PRJNA564810 (1dpf) |
embryo |
baseline |
1dpf, a single-cell transcriptome atlas for zebrafish development |
|
|
|
|
GSE150498 (untreated ctrl) |
intestine |
baseline |
6dpf, untreated ctrl |
|
|
|
|
GSE150498 (DSS treated) |
intestine |
disease |
6dpf, DSS treated |
|
|
|
|
PRJNA668529 (control) |
olfactory rosette |
baseline |
3mpf, intranasal PBS |
|
|
|
|
GSE131136 (all) |
trunk, skin |
baseline |
5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
|
|
|
|
PRJNA641144 (P_INV) |
tumor |
disease |
adult, ZMEL1-INV cells in vivo primary tumors |
|
|
|
|
PRJNA641144 (M_INV) |
tumor |
disease |
adult, ZMEL1-INV cells in vivo metastases |
|
|
|
|
PRJNA641144 (D_INV) |
tumor |
disease |
adult, ZMEL1-INV cells in vitro individual culture |
|
|
|
|
PRJNA641144 (C_INV) |
tumor |
disease |
adult, ZMEL1-INV cells in vitro co-culture |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
10dpf, cd41:GFPlow-runx1-/- |
|
|
|
|
GSE158099 (WT) |
whole body |
baseline |
16dpf, cd41:GFPlow-WT |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
|
|
|