Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment |
Erythroid cells (cluster: 10) |
marker |
DOI:10.1016/j.neuron.2020.09.023 |
|
GSE158142 (15dpf) | brain, eye | baseline | 15dpf, untreatment |
Erythroid cells (cluster: 8) |
marker |
DOI:10.1016/j.neuron.2020.09.023 |
|
GSE158142 (1.5dpf) | head | baseline | 1.5dpf, untreatment |
Erythroid cells (cluster: 15) |
marker |
DOI:10.1016/j.neuron.2020.09.023 |
|
GSE158142 (5dpf) | brain, eye | baseline | 5dpf, untreatment |
Erythroid cells (cluster: 11) |
potential marker |
NA |
|
GSE158142 (2dpf) | head | baseline | 2dpf, untreatment |
Erythroid cells (cluster: 13) |
potential marker |
NA |
|
GSE158142 (3dpf) | head | baseline | 3dpf, untreatment |
Erythroid cells (cluster: 12) |
potential marker |
NA |
|
GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated | ||||
GSE123241 (wild type) | neuromast | baseline | 5dpf, wild type during sensory hair cell regeneration, lateral line sensory | ||||
GSE122680 (1.5dpf) | retina | baseline | 1.5dpf, WT, untreatment | ||||
GSE159709 (melanoma) | tumor | disease | adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells |
Erythroid cells (cluster: 3) Erythroid cells (cluster: 3) |
potential marker potential marker |
NA NA |
|
GSE158099 (runx1 -|-) | whole body | hematopoietic | 2.5dpf, cd41:GFPlow-runx1-/- |
Erythroid cells (cluster: 3) Erythroid cells (cluster: 3) |
potential marker potential marker |
NA NA |
|
GSE151354 (wild type) | cartilage | baseline | 21dpf, wild type | ||||
GSE106587 (WT) | embryo | baseline | 12hpf, 6 somites, wild-type TLAB embryo | ||||
GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells | ||||
GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells | ||||
GSE158142 (12hpf) | head | baseline | 12hpf, 6 somites, untreatment | ||||
GSE158142 (16hpf) | head | baseline | 16hpf, 14 somites, untreatment | ||||
GSE158142 (24hpf) | head | baseline | 24hpf, untreatment | ||||
GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl | ||||
GSE150498 (nod2-|-, 1X DSS) | intestine | disease | 6dpf, nod2-/-, 1X DSS | ||||
GSE123241 (fgf3 mutants) | neuromast | regeneration | 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory | ||||
GSE123241 (fgf3 siblings) | neuromast | regeneration | 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory | ||||
GSE122680 (3dpf) | retina | baseline | 3dpf, WT, untreatment | ||||
GSE158099 (WT) | whole body | baseline | 2.5dpf, cd41:GFPlow-WT |