Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
GSE158142 (12hpf) | head | baseline | 12hpf, 6 somites, untreatment |
Prechordal plate,polsterq (cluster: 14) |
marker |
DOI:10.1016/j.neuron.2020.09.023 |
|
GSE158142 (14hpf) | head | baseline | 14hpf, 10 somites, untreatment |
Placode (cluster: 14) |
marker |
DOI:10.1016/j.neuron.2020.09.023 |
|
GSE106587 (WT) | embryo | baseline | 12hpf, 6 somites, wild-type TLAB embryo |
Placode (cluster: 15) |
potential marker |
NA |
|
PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development |
Hatching gland (cluster: 25) |
potential marker |
NA |
|
GSE158142 (16hpf) | head | baseline | 16hpf, 14 somites, untreatment |
Prechordal plate,polster (cluster: 15) |
potential marker |
NA |
|
GSE158142 (18hpf) | head | baseline | 18hpf, 18 somites, untreatment | ||||
GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells | ||||
GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells | ||||
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | ||||
GSE158142 (20hpf) | head | baseline | 20hpf, 21-22 somites, untreatment | ||||
GSE158142 (24hpf) | head | baseline | 24hpf, untreatment | ||||
GSE158142 (1.5dpf) | head | baseline | 1.5dpf, untreatment | ||||
GSE122680 (24hpf) | retina | baseline | 24hpf, WT, untreatment | ||||
GSE158099 (WT) | whole body | baseline | 2.5dpf, cd41:GFPlow-WT |