Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
pou4f3 | 9: 54290896 ~ 54292162 (+) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000053499 | isl2b | 7: 29992889 ~ 29997444 (+) |
ENSDARG00000035508 | barhl1a | 5: 29746355 ~ 29750377 (-) |
ENSDARG00000004023 | isl1 | 5: 40728613 ~ 40734045 (-) |
ENSDARG00000028485 | cabp5b | 3: 15296824 ~ 15317392 (+) |
ENSDARG00000044457 | gfi1ab | 6: 29004062 ~ 29007493 (-) |
ENSDARG00000091059 | onecut3b | 2: 57504073 ~ 57563888 (+) |
ENSDARG00000079657 | si:dkey-53k12.1 | 2: 48687528 ~ 48693669 (+) |
ENSDARG00000041179 | crygm5 | 9: 22345047 ~ 22352280 (-) |
ENSDARG00000060521 | rbm27 | 9: 54237100 ~ 54280035 (+) |
ENSDARG00000006206 | pou4f3 | 9: 54290896 ~ 54292162 (+) |
ENSDARG00000055294 | atoh1a | 8: 29593986 ~ 29595615 (+) |
ENSDARG00000042141 | myo6b | 17: 36687094 ~ 36842267 (-) |
ENSDARG00000056130 | neurog1 | 14: 26703331 ~ 26704829 (-) |
ENSDARG00000069552 | atoh7 | 13: 25449681 ~ 25450725 (+) |
ENSDARG00000028148 | pax2a | 13: 29770837 ~ 29805529 (+) |
ENSDARG00000007982 | onecut1 | 18: 38755023 ~ 38760271 (+) |
ENSDARG00000002576 | cabp5a | 12: 3848109 ~ 3861759 (+) |
ENSDARG00000009544 | cldnb | 21: 25765734 ~ 25766840 (+) |
ENSDARG00000057936 | lhx5 | 21: 15913128 ~ 15929041 (-) |
ENSDARG00000032746 | tnfsf10l3 | 21: 30701902 ~ 30714665 (-) |
ENSDARG00000019013 | barhl1b | 21: 17478493 ~ 17482465 (-) |
ENSDARG00000093608 | ccl34b.1 | 24: 27396989 ~ 27400630 (-) |
ENSDARG00000003705 | prnprs3 | 25: 3677650 ~ 3685280 (+) |
ENSDARG00000015775 | NA | -- |
ENSDARG00000016655 | NA | -- |
ENSDARG00000033400 | NA | -- |
ENSDARG00000061937 | NA | -- |
ENSDARG00000086954 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 |