Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
runx2a | 17: 5351922 ~ 5516693 (+) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000005453 | foxp2 | 4: 6423041 ~ 6623645 (-) |
ENSDARG00000020465 | ewsr1b | 5: 24873196 ~ 24882360 (-) |
ENSDARG00000058414 | bglap | 3: 1405504 ~ 1408487 (-) |
ENSDARG00000043923 | sox9b | 3: 62521041 ~ 62527696 (-) |
ENSDARG00000019516 | sp7 | 6: 58622831 ~ 58674160 (+) |
ENSDARG00000038780 | ubtfl | 2: 32357226 ~ 32387441 (-) |
ENSDARG00000027199 | smad1 | 1: 35896488 ~ 35929143 (-) |
ENSDARG00000078266 | twist2 | 9: 45839260 ~ 45843479 (+) |
ENSDARG00000061885 | satb2 | 9: 32560399 ~ 32604414 (-) |
ENSDARG00000070428 | si:dkey-222b8.1 | 16: 28861342 ~ 28878080 (-) |
ENSDARG00000054753 | col10a1a | 17: 15542077 ~ 15546862 (-) |
ENSDARG00000040261 | runx2a | 17: 5351922 ~ 5516693 (+) |
ENSDARG00000040917 | cbfb | 18: 22994113 ~ 23072665 (+) |
ENSDARG00000010207 | smad3b | 18: 19772874 ~ 19806209 (+) |
ENSDARG00000005134 | psmd11b | 12: 28346722 ~ 28363166 (-) |
ENSDARG00000003293 | sox9a | 12: 1947593 ~ 1951284 (-) |
ENSDARG00000045094 | si:dkey-222b8.1 | 19: 23932259 ~ 23970686 (+) |
ENSDARG00000042296 | dlx5a | 19: 41470216 ~ 41472228 (-) |
ENSDARG00000044545 | zgc:77262 | 21: 27197711 ~ 27201495 (-) |
ENSDARG00000015546 | alpl | 11: 27968834 ~ 28010171 (+) |
ENSDARG00000075226 | smad4a | 10: 573667 ~ 590083 (+) |
ENSDARG00000097537 | wwp1 | 24: 42127983 ~ 42141008 (+) |
ENSDARG00000067719 | wwtr1 | 22: 38049130 ~ 38114599 (+) |
ENSDARG00000008921 | NA | -- |
ENSDARG00000041204 | NA | -- |
ENSDARG00000006982 | NA | -- |
ENSDARG00000056697 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 |