| Symbol | Location | Gene type | Genome version | Species |
|---|---|---|---|---|
| col28a1a | 19: 25476228 ~ 25512695 (+) | protein_coding | GRCz11 | Danio rerio |
| Gene ID | Symbol | Location |
|---|---|---|
| ENSDARG00000052061 | col4a6 | 7: 50920437 ~ 51102479 (-) |
| ENSDARG00000052063 | col4a5 | 7: 51103232 ~ 51194430 (+) |
| ENSDARG00000026979 | krt1-c5 | 5: 64869176 ~ 64883099 (-) |
| ENSDARG00000012405 | col1a1a | 3: 23221047 ~ 23239458 (+) |
| ENSDARG00000000730 | slc6a22.1 | 6: 41118910 ~ 41138855 (-) |
| ENSDARG00000024847 | col5a2b | 6: 11438972 ~ 11495601 (+) |
| ENSDARG00000009014 | col11a1b | 2: 15389193 ~ 15563194 (-) |
| ENSDARG00000069415 | col17a1a | 1: 49568335 ~ 49605854 (+) |
| ENSDARG00000007534 | itln1 | 1: 15204633 ~ 15224338 (+) |
| ENSDARG00000041339 | zgc:92380 | 9: 48007081 ~ 48039964 (+) |
| ENSDARG00000005762 | col14a1a | 16: 14684916 ~ 15050842 (+) |
| ENSDARG00000040118 | zgc:113232 | 16: 38360002 ~ 38389883 (+) |
| ENSDARG00000091757 | adgrf6 | 20: 35568552 ~ 35578435 (-) |
| ENSDARG00000069093 | col2a1a | 8: 21195420 ~ 21219473 (+) |
| ENSDARG00000078322 | col12a1a | 17: 49785495 ~ 49978986 (-) |
| ENSDARG00000074745 | zmp:0000000760 | 13: 1726953 ~ 1786145 (+) |
| ENSDARG00000035809 | col1a1b | 12: 3095699 ~ 3133483 (-) |
| ENSDARG00000012422 | col11a2 | 19: 7179740 ~ 7225206 (-) |
| ENSDARG00000077084 | col28a1a | 19: 25476228 ~ 25512695 (+) |
| ENSDARG00000019949 | serpinh1b | 15: 29382454 ~ 29388012 (-) |
| ENSDARG00000003395 | col4a3 | 15: 36054864 ~ 36112794 (+) |
| ENSDARG00000002831 | col4a4 | 15: 35951888 ~ 36055401 (-) |
| ENSDARG00000037517 | slc35c2 | 23: 20431140 ~ 20511954 (+) |
| ENSDARG00000022334 | si:ch211-156l18.7 | 11: 12175162 ~ 12184543 (+) |
| ENSDARG00000011407 | col2a1b | 11: 32007 ~ 55224 (-) |
| ENSDARG00000067859 | scospondin | 24: 40016889 ~ 40171461 (+) |
| ENSDARG00000088137 | adgrg2a | 24: 25285758 ~ 25301711 (-) |
| ENSDARG00000017360 | NA | -- |
| ENSDARG00000028236 | NA | -- |
| ENSDARG00000052167 | NA | -- |
| ENSDARG00000028524 | NA | -- |
| ENSDARG00000091643 | NA | -- |
| Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|---|
| GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
| GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
| GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
| GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
| GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
| GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
| GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
| GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
| GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
| GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
| GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
| GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
| GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
| GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 |