Fish Spatial Expression Database

GENE ID: ENSDARG00000011410

Symbol	Location	Gene type	Genome version	Species
aadat	7: 7675685 ~ 7695955 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000011410 (aadat), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000045568	bcat1	4: 17279966 ~ 17297420 (+)
ENSDARG00000062752	mfap3l	7: 7662195 ~ 7676186 (-)
ENSDARG00000011410	aadat	7: 7675685 ~ 7695955 (-)
ENSDARG00000053010	lpcat2	7: 35385472 ~ 35409027 (-)
ENSDARG00000023645	kyat1	5: 33264842 ~ 33280699 (-)
ENSDARG00000077174	qsox2	5: 64277604 ~ 64311869 (+)
ENSDARG00000032584	thnsl2	5: 72094502 ~ 72105216 (-)
ENSDARG00000054849	bcat2	3: 29949984 ~ 29968055 (-)
ENSDARG00000087873	eevs	6: 43438074 ~ 43449013 (-)
ENSDARG00000059972	raly	6: 50021410 ~ 50204262 (-)
ENSDARG00000068483	neto1	2: 30463825 ~ 30480455 (+)
ENSDARG00000000540	asdurf	9: 41079669 ~ 41090343 (-)
ENSDARG00000087956	she	16: 22587661 ~ 22603354 (+)
ENSDARG00000034270	ogdha	8: 45762484 ~ 45838481 (-)
ENSDARG00000016830	rimkla	8: 26868105 ~ 26887308 (+)
ENSDARG00000044935	hpdb	8: 34731982 ~ 34742234 (+)
ENSDARG00000015765	iah1	17: 35243753 ~ 35247374 (+)
ENSDARG00000019364	mbip	17: 38295847 ~ 38308379 (+)
ENSDARG00000003449	pde10a	13: 4505079 ~ 4620715 (+)
ENSDARG00000076487	haao	13: 8954667 ~ 8982782 (+)
ENSDARG00000079249	ogdhl	13: 29352842 ~ 29406695 (+)
ENSDARG00000009160	kmo	13: 42272515 ~ 42306348 (-)
ENSDARG00000062817	crym	12: 10448226 ~ 10462503 (+)
ENSDARG00000060288	plpbp	23: 33963619 ~ 33976116 (+)
ENSDARG00000018426	aldh7a1	10: 16006905 ~ 16028082 (-)
ENSDARG00000069726	glis3	10: 644574 ~ 690170 (-)
ENSDARG00000016897	fbxo15	24: 15655069 ~ 15669210 (+)
ENSDARG00000071596	neto1l	24: 15897717 ~ 16136685 (+)
ENSDARG00000016415	dhtkd1	25: 8031999 ~ 8055229 (-)
ENSDARG00000051816	aass	25: 28279577 ~ 28336106 (+)
ENSDARG00000013423	NA	--
ENSDARG00000028345	NA	--
ENSDARG00000030548	NA	--
ENSDARG00000073805	NA	--
ENSDARG00000086180	NA	--
ENSDARG00000087460	NA	--
ENSDARG00000088056	NA	--

Expression

	Dataset ID	Tissue / organ	Technique	Experiment type	Sample description	Source dataset ID	Project ID
	GSE120581 (tail replicate1)	tail	Geo-seq	baseline	late embryo, 2.3dpf, the tails of embryos, untreatment	GSM3402086-GSM3402121	GSE120581
	GSE120581 (tail replicate2)	tail	Geo-seq	baseline	late embryo, 2.3dpf, the tails of embryos, untreatment	GSM3402122-GSM3402157	GSE120581

After clicking the magnifying glass button, the expression information will be displayed below.

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

one-cell stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE158849 (embryo replicate3)	embryo	baseline	one-cell stage, 0.3hpf, untreatment	GSM4812177	GSE158849

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, A to V)	embryo	baseline	shield stage, intact embryo, sectioned from animal to vegetal pole	GSM1448795	GSE59873
GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873
GSE59873 (shield, R to L)	embryo	baseline	shield stage, intact embryo, sectioned from right to left	GSM1448799	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000011410

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.