Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
si:dkey-178k16.1 | 23: 11864223 ~ 12015139 (-) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000092143 | ank1a | 5: 68900506 ~ 68927728 (-) |
ENSDARG00000024325 | cert1a | 5: 50912729 ~ 50970974 (+) |
ENSDARG00000015184 | mpp3a | 3: 38647987 ~ 38692920 (-) |
ENSDARG00000075815 | slc12a5a | 6: 55449300 ~ 55585423 (-) |
ENSDARG00000062123 | agap1 | 6: 16043318 ~ 16394528 (-) |
ENSDARG00000073756 | slc12a7a | 2: 24027744 ~ 24069434 (-) |
ENSDARG00000079455 | nlgn4xa | 1: 32521469 ~ 32693950 (+) |
ENSDARG00000036281 | NA | 1: 55215787 ~ 55238610 (-) |
ENSDARG00000038938 | itprid2 | 9: 44304980 ~ 44420380 (+) |
ENSDARG00000059809 | caska | 9: 33366683 ~ 33608427 (-) |
ENSDARG00000077761 | nlgn4xb | 9: 55321322 ~ 55418196 (+) |
ENSDARG00000093374 | NA | 20: 2287298 ~ 2361226 (-) |
ENSDARG00000077709 | iqsec2b | 8: 36803415 ~ 36978659 (+) |
ENSDARG00000078187 | slc12a5b | 8: 37280532 ~ 37391372 (-) |
ENSDARG00000006683 | arhgef6 | 14: 31799787 ~ 31856819 (-) |
ENSDARG00000076796 | dlg3 | 14: 33070284 ~ 33177997 (-) |
ENSDARG00000021352 | gria1a | 14: 34125855 ~ 34276574 (-) |
ENSDARG00000062667 | mpp3b | 12: 16233077 ~ 16276276 (+) |
ENSDARG00000042677 | cadm1b | 15: 18863872 ~ 18988585 (+) |
ENSDARG00000037496 | gria4a | 15: 44499187 ~ 44810137 (-) |
ENSDARG00000076364 | si:dkey-178k16.1 | 23: 11864223 ~ 12015139 (-) |
ENSDARG00000026333 | xkr7 | 23: 8989168 ~ 9015026 (+) |
ENSDARG00000059368 | gria4b | 21: 21894067 ~ 22082510 (+) |
ENSDARG00000031075 | cadm1a | 21: 23953181 ~ 24412427 (+) |
ENSDARG00000013110 | dmtn | 10: 20108557 ~ 20146544 (+) |
ENSDARG00000074480 | cnksr2a | 24: 25485264 ~ 25673442 (-) |
ENSDARG00000062058 | slc12a7b | 24: 39778648 ~ 39885785 (-) |
ENSDARG00000087822 | agap3 | 24: 34139146 ~ 34335265 (-) |
ENSDARG00000008366 | NA | -- |
ENSDARG00000035103 | NA | -- |
ENSDARG00000061117 | NA | -- |
ENSDARG00000070585 | NA | -- |
ENSDARG00000075908 | NA | -- |
ENSDARG00000012203 | NA | -- |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, V to D) | embryo | baseline | shield stage, intact embryo, sectioned from ventral to dorsal end | GSM1448800
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, A to P, replicate) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate | GSM1448804
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
GSE59873 (10 somite, L to R) | embryo | baseline | 10 somite stage, intact embryo, sectioned from left to right | GSM1448808
|
GSE59873 | |
GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 | |
cvab004 (S2) | heart | baseline | late embryo, 1.08dpf, untreatment | S2 | cvab004 | |
cvab004 (S4) | heart | baseline | late embryo, 1.08dpf, untreatment | S4 | cvab004 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE74652 (3 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury | GSM1924887
|
GSE74652 |