Fish Spatial Expression Database

GENE ID: ENSDARG00000059390

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000059390 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000069431	slc26a4	4: 18782539 ~ 18796539 (+)
ENSDARG00000039392	wnk1b	4: 8045564 ~ 8155571 (-)
ENSDARG00000077570	cdh16	7: 44857271 ~ 44957503 (-)
ENSDARG00000078560	slc9a5	7: 34620418 ~ 34653251 (+)
ENSDARG00000003203	rhcga	7: 14291323 ~ 14302716 (+)
ENSDARG00000051914	slc14a2	5: 52167986 ~ 52177850 (+)
ENSDARG00000088967	wnk4b	3: 22432069 ~ 22551356 (+)
ENSDARG00000054127	slc26a6l	6: 40723554 ~ 40732692 (+)
ENSDARG00000034189	oxsr1a	2: 23677179 ~ 23726605 (+)
ENSDARG00000023713	aqp1a.1	2: 2737422 ~ 2749333 (+)
ENSDARG00000086117	umod	1: 55600504 ~ 55606573 (+)
ENSDARG00000058780	slc9a2	9: 6963039 ~ 6991650 (-)
ENSDARG00000087203	stk39	9: 48943471 ~ 49052004 (+)
ENSDARG00000086265	bsnd	20: 7243879 ~ 7251770 (+)
ENSDARG00000097292	slc26a6	8: 26253252 ~ 26267110 (+)
ENSDARG00000055835	slc26a6	8: 26268100 ~ 26288506 (+)
ENSDARG00000041858	ren	8: 37111643 ~ 37132922 (+)
ENSDARG00000028824	slc34a1a	14: 834619 ~ 858987 (-)
ENSDARG00000088484	kcnj1a.6	18: 48491007 ~ 48500545 (-)
ENSDARG00000091232	kcnj1a.1	18: 48542900 ~ 48558420 (-)
ENSDARG00000058498	slc9a3.1	19: 10692166 ~ 10730488 (-)
ENSDARG00000036722	slc9a3.2	19: 10738150 ~ 10771558 (-)
ENSDARG00000021611	si:dkey-151g10.3	23: 25172682 ~ 25222673 (+)
ENSDARG00000022560	clcnk	23: 24272421 ~ 24291927 (+)
ENSDARG00000044808	slc4a4b	21: 5993188 ~ 6104568 (+)
ENSDARG00000069518	aqp3b	21: 16980141 ~ 16988766 (+)
ENSDARG00000019693	clcn5a	21: 30662263 ~ 30696595 (+)
ENSDARG00000008473	asb14a	11: 42585138 ~ 42599018 (+)
ENSDARG00000013871	slc5a1	10: 17135631 ~ 17159761 (-)
ENSDARG00000075382	slc9a6b	10: 26571174 ~ 26597800 (+)
ENSDARG00000078992	wnk1a	25: 21114671 ~ 21156678 (-)
ENSDARG00000059390	NA	--
ENSDARG00000061809	NA	--
ENSDARG00000077051	NA	--
ENSDARG00000079778	NA	--
ENSDARG00000095660	NA	--
ENSDARG00000016381	NA	--
ENSDARG00000088996	NA	--
ENSDARG00000089506	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, A to V)	embryo	baseline	shield stage, intact embryo, sectioned from animal to vegetal pole	GSM1448795	GSE59873
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873
GSE59873 (shield, L to R)	embryo	baseline	shield stage, intact embryo, sectioned from left to right	GSM1448798	GSE59873
GSE59873 (shield, R to L)	embryo	baseline	shield stage, intact embryo, sectioned from right to left	GSM1448799	GSE59873
GSE59873 (shield, V to D)	embryo	baseline	shield stage, intact embryo, sectioned from ventral to dorsal end	GSM1448800	GSE59873
GSE59873 (shield, D to V)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end	GSM1448801	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873
GSE59873 (10 somite, R to L)	embryo	baseline	10 somite stage, intact embryo, sectioned from right to left	GSM1448809	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf trunk)	embryo	baseline	late embryo, 1.67dpf, trunk, untreatment	GSM3672149	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

adult

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE74652 (7 days-post-cryoinjury)	heart	regeneration	adult, cryoinjured ventricle of the heart, extracted heart at 7 days-post-cryoinjury	GSM1924888	GSE74652

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000059390

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.