| Symbol | Location | Gene type | Genome version | Species |
|---|---|---|---|---|
| smad4b | 5: 6875272 ~ 6922168 (+) | protein_coding | GRCz11 | Danio rerio |
| Gene ID | Symbol | Location |
|---|---|---|
| ENSDARG00000012649 | smad4b | 5: 6875272 ~ 6922168 (+) |
| ENSDARG00000007812 | sp3b | 6: 10721765 ~ 10740365 (-) |
| ENSDARG00000061508 | tgfbrap1 | 6: 15036828 ~ 15065376 (-) |
| ENSDARG00000070122 | stk11ip | 6: 20954400 ~ 20999623 (+) |
| ENSDARG00000042215 | pias4b | 2: 57447105 ~ 57473991 (-) |
| ENSDARG00000023933 | skila | 2: 37307326 ~ 37353098 (-) |
| ENSDARG00000010442 | rnf11a | 1: 52130164 ~ 52137313 (+) |
| ENSDARG00000001549 | sp3a | 9: 2762270 ~ 2777286 (+) |
| ENSDARG00000016181 | trim33 | 8: 10956468 ~ 11004739 (-) |
| ENSDARG00000042151 | skia | 8: 17395929 ~ 17516448 (-) |
| ENSDARG00000040635 | rnf11b | 8: 16424722 ~ 16464453 (-) |
| ENSDARG00000042725 | cebpb | 8: 28448267 ~ 28449782 (-) |
| ENSDARG00000059707 | NA | 18: 17786548 ~ 17997474 (+) |
| ENSDARG00000095732 | znf423 | 18: 17959681 ~ 17995076 (+) |
| ENSDARG00000055630 | foxh1 | 12: 13722385 ~ 13730501 (-) |
| ENSDARG00000021494 | hnf4a | 23: 25832689 ~ 25865856 (+) |
| ENSDARG00000016858 | smad7 | 21: 3419459 ~ 3452683 (-) |
| ENSDARG00000019457 | tfe3b | 11: 25504215 ~ 25519837 (+) |
| ENSDARG00000008034 | skib | 11: 25782721 ~ 25829712 (-) |
| ENSDARG00000075747 | zfyve16 | 10: 2975974 ~ 3026523 (+) |
| ENSDARG00000021938 | smad9 | 10: 34960751 ~ 35002459 (-) |
| ENSDARG00000022904 | skilb | 24: 26373341 ~ 26386627 (-) |
| ENSDARG00000078994 | muc2.2 | 25: 8316953 ~ 8351780 (+) |
| ENSDARG00000003323 | NA | -- |
| ENSDARG00000004729 | NA | -- |
| ENSDARG00000023701 | NA | -- |
| ENSDARG00000062723 | NA | -- |
| ENSDARG00000088703 | NA | -- |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
| GSE158849 (embryo replicate2) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812176
|
GSE158849 | |
| GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
| GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
| GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (10 somite, A to P, replicate) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate | GSM1448804
|
GSE59873 | |
| GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
| GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
| GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
| GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
| GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
| GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
| GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
| GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
| GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
| GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 |