Fish Spatial Expression Database

GENE ID: ENSDARG00000002129

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000002129 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000059053	slc13a4	4: 4803698 ~ 4832149 (+)
ENSDARG00000075831	slc7a8a	7: 24208611 ~ 24236364 (-)
ENSDARG00000016141	slc6a2	7: 35348471 ~ 35380186 (-)
ENSDARG00000055226	slc7a7	7: 19562045 ~ 19587542 (+)
ENSDARG00000063288	slc2a11b	5: 10014604 ~ 10046183 (+)
ENSDARG00000053961	slc2a11a	6: 40975655 ~ 40992683 (-)
ENSDARG00000058090	cfap57	2: 13462305 ~ 13673494 (+)
ENSDARG00000057743	si:dkey-10f21.4	2: 15035090 ~ 15041846 (-)
ENSDARG00000056196	slc2a2	2: 25816843 ~ 25837986 (+)
ENSDARG00000025074	slc25a10	1: 56421754 ~ 56435182 (-)
ENSDARG00000040907	gcgb	9: 51265283 ~ 51271597 (+)
ENSDARG00000078468	fap	9: 51225345 ~ 51261339 (+)
ENSDARG00000032010	slc15a2	9: 37320222 ~ 37339656 (+)
ENSDARG00000024471	nsl1	20: 37814345 ~ 37820939 (-)
ENSDARG00000069478	slc13a3	8: 28667021 ~ 28695383 (+)
ENSDARG00000088816	trabd2b	8: 19801865 ~ 19904124 (-)
ENSDARG00000089192	zmp:0000001267	17: 49529197 ~ 49543048 (-)
ENSDARG00000017165	slc3a1	13: 10649069 ~ 10672538 (-)
ENSDARG00000091232	kcnj1a.1	18: 48542900 ~ 48558420 (-)
ENSDARG00000068387	slc6a18	19: 645872 ~ 657439 (-)
ENSDARG00000025478	gipr	15: 28940352 ~ 28974120 (+)
ENSDARG00000041644	si:dkey-194e6.1	23: 40872688 ~ 40895168 (-)
ENSDARG00000021573	slc16a7	23: 9867483 ~ 9889330 (+)
ENSDARG00000022560	clcnk	23: 24272421 ~ 24291927 (+)
ENSDARG00000043021	slc26a11	22: 11497366 ~ 11520405 (-)
ENSDARG00000079296	gcga	22: 11617520 ~ 11626018 (-)
ENSDARG00000079420	dpp4	22: 11628438 ~ 11648322 (-)
ENSDARG00000046136	NA	--
ENSDARG00000056960	NA	--
ENSDARG00000087194	NA	--
ENSDARG00000090422	NA	--
ENSDARG00000002129	NA	--
ENSDARG00000074923	NA	--
ENSDARG00000078705	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873
GSE59873 (shield, R to L)	embryo	baseline	shield stage, intact embryo, sectioned from right to left	GSM1448799	GSE59873
GSE59873 (shield, D to V)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end	GSM1448801	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873
GSE59873 (10 somite, R to L)	embryo	baseline	10 somite stage, intact embryo, sectioned from right to left	GSM1448809	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf trunk)	embryo	baseline	late embryo, 1.67dpf, trunk, untreatment	GSM3672149	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000002129

Function

There is no KEGG result!

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

GENE ID: ENSDARG00000002129

Function

There is no KEGG result!

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.