| Symbol | Location | Gene type | Genome version | Species |
|---|---|---|---|---|
| -- | -- | -- | Zv9 | Danio rerio |
| Gene ID | Symbol | Location |
|---|---|---|
| ENSDARG00000070546 | msgn1 | 4: 306036 ~ 308006 (+) |
| ENSDARG00000056012 | eve1 | 3: 23641935 ~ 23643830 (-) |
| ENSDARG00000069252 | mixl1 | 20: 43715157 ~ 43723860 (-) |
| ENSDARG00000019920 | lft1 | 20: 35073981 ~ 35076387 (-) |
| ENSDARG00000059073 | gsc | 17: 19343015 ~ 19345521 (-) |
| ENSDARG00000011235 | otx2b | 17: 44244659 ~ 44249720 (-) |
| ENSDARG00000003411 | foxa2 | 17: 42565998 ~ 42568498 (-) |
| ENSDARG00000044059 | lft2 | 17: 8308182 ~ 8312923 (-) |
| ENSDARG00000044098 | egr2a | 17: 43663504 ~ 43677471 (-) |
| ENSDARG00000018004 | nkx2.5 | 14: 24241241 ~ 24244034 (+) |
| ENSDARG00000036292 | cdx4 | 14: 32961718 ~ 32965169 (-) |
| ENSDARG00000087094 | foxa | 14: 33973146 ~ 33981544 (-) |
| ENSDARG00000021201 | noto | 13: 14976108 ~ 14978104 (+) |
| ENSDARG00000003399 | fgf8a | 13: 28495419 ~ 28501985 (+) |
| ENSDARG00000012788 | foxa3 | 18: 46350574 ~ 46354269 (-) |
| ENSDARG00000039173 | ctslb | 12: 16617138 ~ 16619757 (-) |
| ENSDARG00000074306 | ctslb | 12: 16691584 ~ 16694092 (-) |
| ENSDARG00000014626 | dlx3b | 12: 5708400 ~ 5711920 (+) |
| ENSDARG00000055527 | cmn | 12: 13118540 ~ 13164249 (+) |
| ENSDARG00000006110 | chrd | 15: 46790676 ~ 46828958 (-) |
| ENSDARG00000040955 | dharma | 15: 29011290 ~ 29012493 (-) |
| ENSDARG00000017821 | gata5 | 23: 7379728 ~ 7391028 (+) |
| ENSDARG00000044774 | pou5f3 | 21: 13685853 ~ 13690712 (-) |
| ENSDARG00000035095 | tdgf1 | 10: 1955475 ~ 1961930 (-) |
| ENSDARG00000075113 | nanog | 24: 12835935 ~ 12842103 (+) |
| ENSDARG00000070913 | sox2 | 22: 37347896 ~ 37349967 (-) |
| ENSDARG00000030110 | myod1 | 25: 31421253 ~ 31423493 (-) |
| ENSDARG00000014277 | NA | -- |
| ENSDARG00000035831 | NA | -- |
| ENSDARG00000041341 | NA | -- |
| ENSDARG00000041345 | NA | -- |
| ENSDARG00000009737 | NA | -- |
| ENSDARG00000009905 | NA | -- |
| ENSDARG00000036385 | NA | -- |
| ENSDARG00000040299 | NA | -- |
| ENSDARG00000087811 | NA | -- |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
| GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
| GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
| GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
| GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
| GSE59873 (shield, V to D) | embryo | baseline | shield stage, intact embryo, sectioned from ventral to dorsal end | GSM1448800
|
GSE59873 | |
| GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
| GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
| GSE59873 (10 somite, A to P, replicate) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate | GSM1448804
|
GSE59873 | |
| GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
| GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
| GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
| GSE59873 (10 somite, L to R) | embryo | baseline | 10 somite stage, intact embryo, sectioned from left to right | GSM1448808
|
GSE59873 | |
| GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
| GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
| GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
| GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
| GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
| GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
| GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
| GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
| GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
| GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
| GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
| GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
| GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
| GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
| GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 |