Fish Spatial Expression Database

GENE ID: ENSDARG00000018605

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000018605 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000003193	rassf7b	7: 49654588 ~ 49692001 (+)
ENSDARG00000010586	tex9	7: 34496113 ~ 34506046 (-)
ENSDARG00000012030	dnaaf1	7: 29012033 ~ 29017892 (+)
ENSDARG00000004196	tnfsf10l	7: 22911610 ~ 22956889 (-)
ENSDARG00000056007	cyb5d1	7: 20771754 ~ 20778584 (-)
ENSDARG00000058140	ttc25	3: 17910569 ~ 17928233 (+)
ENSDARG00000044400	wdr78	6: 30689239 ~ 30701207 (+)
ENSDARG00000057276	iqca1	6: 15762647 ~ 15893049 (+)
ENSDARG00000069435	cfap58	1: 47831619 ~ 48012257 (+)
ENSDARG00000069827	crygm2d11	9: 22098575 ~ 22099536 (-)
ENSDARG00000004204	efhc2	9: 33758720 ~ 33781845 (-)
ENSDARG00000055676	armt1	20: 26387179 ~ 26391958 (-)
ENSDARG00000009743	efhc1	20: 48097252 ~ 48157755 (-)
ENSDARG00000079997	si:zfos-223e1.2	20: 48488954 ~ 48516765 (-)
ENSDARG00000000690	sypl2b	8: 25079470 ~ 25090458 (+)
ENSDARG00000058940	si:ch211-248e11.2	8: 11542852 ~ 11550273 (-)
ENSDARG00000058280	si:dkey-208b23.5	8: 13036221 ~ 13064330 (-)
ENSDARG00000005814	klhl10a	17: 4386649 ~ 4396692 (-)
ENSDARG00000036189	spata4	14: 36393854 ~ 36397876 (-)
ENSDARG00000074179	calhm2.2	13: 25418561 ~ 25424269 (+)
ENSDARG00000021462	daw1	18: 46382484 ~ 46394080 (+)
ENSDARG00000010662	fbxo36a	18: 41226444 ~ 41232297 (-)
ENSDARG00000036412	si:ch211-81a5.5	19: 9091673 ~ 9107063 (+)
ENSDARG00000026322	dhrs13a.1	10: 36795861 ~ 36808348 (-)
ENSDARG00000020158	spag6	24: 17269849 ~ 17279904 (+)
ENSDARG00000074049	NA	--
ENSDARG00000078976	NA	--
ENSDARG00000039193	NA	--
ENSDARG00000039344	NA	--
ENSDARG00000007792	NA	--
ENSDARG00000018605	NA	--
ENSDARG00000039491	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, L to R)	embryo	baseline	shield stage, intact embryo, sectioned from left to right	GSM1448798	GSE59873
GSE59873 (shield, R to L)	embryo	baseline	shield stage, intact embryo, sectioned from right to left	GSM1448799	GSE59873
GSE59873 (shield, D to V)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end	GSM1448801	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873
GSE59873 (10 somite, R to L)	embryo	baseline	10 somite stage, intact embryo, sectioned from right to left	GSM1448809	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf trunk)	embryo	baseline	late embryo, 1.67dpf, trunk, untreatment	GSM3672149	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000018605

Function

There is no KEGG result!

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

GENE ID: ENSDARG00000018605

Function

There is no KEGG result!

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.