Fish Spatial Expression Database

GENE ID: ENSDARG00000021065

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000021065 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000014804	cacna2d1a	4: 19768679 ~ 19884440 (-)
ENSDARG00000026855	cacna2d4a	4: 20271463 ~ 20292853 (-)
ENSDARG00000043010	camk2d1	7: 57725708 ~ 57880131 (+)
ENSDARG00000068246	plcb3	7: 60255852 ~ 60351876 (-)
ENSDARG00000090965	ripk3	7: 1330501 ~ 1348640 (-)
ENSDARG00000076401	cacng3b	3: 35298078 ~ 35375978 (+)
ENSDARG00000039240	cacng5b	3: 56366395 ~ 56394018 (+)
ENSDARG00000052360	cacng1b	3: 61043774 ~ 61065055 (-)
ENSDARG00000003326	cacng5a	6: 21395051 ~ 21455822 (+)
ENSDARG00000014273	camk2d2	1: 14163506 ~ 14234076 (-)
ENSDARG00000070624	cacng7b	16: 12963020 ~ 13004166 (-)
ENSDARG00000004049	marcksa	20: 3312859 ~ 3319736 (-)
ENSDARG00000042552	cacna1sb	8: 25767610 ~ 25808403 (+)
ENSDARG00000003706	ryr2b	17: 20009132 ~ 20118244 (-)
ENSDARG00000090381	NA	17: 2348540 ~ 2386569 (-)
ENSDARG00000025106	ppp3cb	14: 7789093 ~ 7888748 (-)
ENSDARG00000056206	camk2g2	13: 22119798 ~ 22243311 (+)
ENSDARG00000031427	calm2a	13: 8777633 ~ 8785610 (-)
ENSDARG00000068763	plcg2	18: 13235714 ~ 13293642 (+)
ENSDARG00000073752	NA	18: 9749375 ~ 9948604 (+)
ENSDARG00000071395	camk2g1	12: 35345830 ~ 35505610 (-)
ENSDARG00000039385	dlg4b	23: 44307996 ~ 44332790 (+)
ENSDARG00000053617	camk2a	21: 43897128 ~ 43952958 (-)
ENSDARG00000056615	cybb	11: 29795155 ~ 29818866 (-)
ENSDARG00000078760	cacna2d3	11: 36688794 ~ 36765834 (-)
ENSDARG00000029457	cacna1sa	22: 912450 ~ 968484 (-)
ENSDARG00000023886	cacna2d4b	25: 19023737 ~ 19090628 (-)
ENSDARG00000039238	NA	--
ENSDARG00000024004	NA	--
ENSDARG00000059692	NA	--
ENSDARG00000021065	NA	--
ENSDARG00000052717	NA	--
ENSDARG00000077552	NA	--
ENSDARG00000079171	NA	--
ENSDARG00000079540	NA	--
ENSDARG00000089308	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873
GSE59873 (shield, L to R)	embryo	baseline	shield stage, intact embryo, sectioned from left to right	GSM1448798	GSE59873
GSE59873 (shield, R to L)	embryo	baseline	shield stage, intact embryo, sectioned from right to left	GSM1448799	GSE59873
GSE59873 (shield, V to D)	embryo	baseline	shield stage, intact embryo, sectioned from ventral to dorsal end	GSM1448800	GSE59873
GSE59873 (shield, D to V)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end	GSM1448801	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

late embryo

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000021065

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.