Fish Spatial Expression Database

GENE ID: ENSDARG00000029351

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000029351 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000005092	cep89	7: 38395197 ~ 38500305 (+)
ENSDARG00000003269	clcn3	7: 7511914 ~ 7643941 (+)
ENSDARG00000033126	prkrip1	5: 59234421 ~ 59248274 (+)
ENSDARG00000059982	poc5	5: 45938316 ~ 45958838 (-)
ENSDARG00000075181	crfb16	2: 5521671 ~ 5536927 (+)
ENSDARG00000102557	ftr87	2: 51037175 ~ 51059691 (-)
ENSDARG00000057248	sclt1	1: 12364456 ~ 12397258 (-)
ENSDARG00000010300	traf3ip1	9: 45605410 ~ 45667487 (+)
ENSDARG00000055115	dtnbp1a	16: 25504109 ~ 25535430 (-)
ENSDARG00000087369	cep162	16: 37891735 ~ 37944480 (+)
ENSDARG00000078327	NA	20: 3108597 ~ 3130881 (+)
ENSDARG00000043026	ttbk2b	20: 25911342 ~ 25928355 (+)
ENSDARG00000058000	cep350	8: 14559378 ~ 14609284 (-)
ENSDARG00000012449	si:ch211-169p10.1	8: 7975745 ~ 8034978 (+)
ENSDARG00000042954	slc17a9a	8: 23152244 ~ 23165413 (+)
ENSDARG00000091326	cep120	8: 247163 ~ 286323 (+)
ENSDARG00000005670	ttbk2a	17: 45216084 ~ 45254585 (-)
ENSDARG00000074636	cep170b	17: 1544903 ~ 1620346 (+)
ENSDARG00000052575	arl13a	14: 41293110 ~ 41308561 (-)
ENSDARG00000077098	trim65	12: 45225166 ~ 45238759 (-)
ENSDARG00000055206	dtnbp1b	19: 26161709 ~ 26235219 (-)
ENSDARG00000074137	c2cd3	15: 15258758 ~ 15311768 (+)
ENSDARG00000097071	si:ch211-66i15.4	23: 32400806 ~ 32404029 (-)
ENSDARG00000011049	slc17a9b	23: 17522867 ~ 17549145 (+)
ENSDARG00000089071	ushbp1	11: 6076646 ~ 6101104 (+)
ENSDARG00000035808	clcn4	11: 44144612 ~ 44163164 (-)
ENSDARG00000045257	decr2	24: 37709191 ~ 37721739 (+)
ENSDARG00000059175	cep19	22: 2937485 ~ 2942954 (+)
ENSDARG00000012524	NA	--
ENSDARG00000013015	NA	--
ENSDARG00000027857	NA	--
ENSDARG00000055720	NA	--
ENSDARG00000089422	NA	--
ENSDARG00000029351	NA	--
ENSDARG00000039895	NA	--
ENSDARG00000055385	NA	--
ENSDARG00000088478	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, A to V)	embryo	baseline	shield stage, intact embryo, sectioned from animal to vegetal pole	GSM1448795	GSE59873
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, V to D)	embryo	baseline	shield stage, intact embryo, sectioned from ventral to dorsal end	GSM1448800	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873
GSE59873 (10 somite, R to L)	embryo	baseline	10 somite stage, intact embryo, sectioned from right to left	GSM1448809	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000029351

Function

There is no KEGG result!

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

GENE ID: ENSDARG00000029351

Function

There is no KEGG result!

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.