Fish Spatial Expression Database

GENE ID: ENSDARG00000060317

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000060317 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000043798	ms4a17a.1	4: 76692834 ~ 76701249 (+)
ENSDARG00000016687	acadvl	7: 20298333 ~ 20333524 (+)
ENSDARG00000059770	cpt1aa	7: 48805534 ~ 48830121 (+)
ENSDARG00000079248	mn1b	5: 66676356 ~ 66702479 (-)
ENSDARG00000037943	cpt1cb	3: 32228901 ~ 32290096 (-)
ENSDARG00000014727	acox1	6: 23122789 ~ 23138502 (+)
ENSDARG00000038900	acadm	2: 26470070 ~ 26476150 (-)
ENSDARG00000030514	acsl1a	1: 17537451 ~ 17587552 (-)
ENSDARG00000040179	zgc:101562	20: 2642855 ~ 2647566 (+)
ENSDARG00000036820	mgll	8: 26292560 ~ 26326501 (+)
ENSDARG00000031044	lipg	8: 32376936 ~ 32386042 (-)
ENSDARG00000032831	htra1a	17: 21919131 ~ 21959556 (+)
ENSDARG00000003854	acsl1b	14: 937194 ~ 970853 (-)
ENSDARG00000088357	acadl	18: 39487486 ~ 39505847 (+)
ENSDARG00000076780	acadsb	12: 49156997 ~ 49166761 (-)
ENSDARG00000036942	gpd1c	19: 317629 ~ 325584 (-)
ENSDARG00000035889	zbtb8b	19: 32505747 ~ 32518556 (-)
ENSDARG00000042658	acad8	15: 19335646 ~ 19348383 (+)
ENSDARG00000068840	zgc:66024	15: 34939906 ~ 34944831 (+)
ENSDARG00000010782	zgc:55621	15: 34946928 ~ 34960914 (+)
ENSDARG00000093176	zgc:77118	15: 35114784 ~ 35126632 (-)
ENSDARG00000087950	CABZ01044053.1	15: 46633275 ~ 46673161 (-)
ENSDARG00000026333	xkr7	23: 8989168 ~ 9015026 (+)
ENSDARG00000089434	etv7	23: 5086317 ~ 5101847 (-)
ENSDARG00000042975	auh	10: 5422575 ~ 5475690 (+)
ENSDARG00000076529	mn1a	10: 4095917 ~ 4112836 (+)
ENSDARG00000045411	acad11	24: 11350330 ~ 11446166 (-)
ENSDARG00000061660	CABZ01055347.1	24: 36840652 ~ 36873220 (+)
ENSDARG00000019532	fads2	25: 4133488 ~ 4148719 (-)
ENSDARG00000062054	cpt1ab	25: 23591990 ~ 23645806 (+)
ENSDARG00000070883	NA	--
ENSDARG00000059310	NA	--
ENSDARG00000060317	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000060317

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.