Fish Spatial Expression Database

GENE ID: ENSDARG00000062840

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000062840 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000076302	dtx4a	7: 18557939 ~ 18601206 (-)
ENSDARG00000090099	si:dkeyp-67a8.4	7: 5530154 ~ 5549304 (+)
ENSDARG00000052094	notch1b	5: 65679595 ~ 65782785 (-)
ENSDARG00000095739	si:dkey-73p2.1	3: 4266289 ~ 4268994 (+)
ENSDARG00000038072	ptx4	3: 27642078 ~ 27663447 (+)
ENSDARG00000052139	notch3	3: 53526025 ~ 53559581 (-)
ENSDARG00000010791	dla	1: 54013457 ~ 54026352 (+)
ENSDARG00000021389	jag2b	20: 21391181 ~ 21475620 (+)
ENSDARG00000042829	si:dkey-30j22.1	20: 35576739 ~ 35706379 (-)
ENSDARG00000043130	notch2	8: 19548985 ~ 19619792 (+)
ENSDARG00000060081	crb2b	8: 2878756 ~ 2906214 (+)
ENSDARG00000053279	apln	14: 33722950 ~ 33757715 (+)
ENSDARG00000013168	jag1b	13: 35339182 ~ 35390095 (+)
ENSDARG00000087558	si:ch73-105b23.1	13: 8825192 ~ 8829392 (-)
ENSDARG00000079144	bcl2l11	13: 47361104 ~ 47403443 (-)
ENSDARG00000020219	dld	13: 6075572 ~ 6081803 (-)
ENSDARG00000014246	jag2a	13: 33488032 ~ 33551699 (+)
ENSDARG00000092762	si:dkey-5i3.1	18: 8937718 ~ 8943162 (+)
ENSDARG00000005216	zgc:158328	15: 35253247 ~ 35339302 (+)
ENSDARG00000060106	crb2a	21: 8478774 ~ 8513192 (-)
ENSDARG00000074808	megf6b	11: 41712391 ~ 41779281 (-)
ENSDARG00000057590	si:ch1073-396h14.1	22: 15643174 ~ 15693085 (-)
ENSDARG00000015502	adam10b	25: 150570 ~ 160547 (+)
ENSDARG00000007921	NA	--
ENSDARG00000044841	NA	--
ENSDARG00000094311	NA	--
ENSDARG00000062245	NA	--
ENSDARG00000062840	NA	--
ENSDARG00000076149	NA	--
ENSDARG00000077129	NA	--
ENSDARG00000087902	NA	--
ENSDARG00000089347	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (shield, V to D)	embryo	baseline	shield stage, intact embryo, sectioned from ventral to dorsal end	GSM1448800	GSE59873

10 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873

15 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
	GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873

late embryo

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.