Fish Spatial Expression Database

GENE ID: ENSDARG00000076691

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000076691 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000043010	camk2d1	7: 57725708 ~ 57880131 (+)
ENSDARG00000077329	nlgn2a	7: 21940857 ~ 22132265 (-)
ENSDARG00000025728	grin1b	5: 29597645 ~ 29643930 (-)
ENSDARG00000011065	camk2b1	5: 20931252 ~ 21030996 (-)
ENSDARG00000034493	grin2aa	3: 27071749 ~ 27277695 (+)
ENSDARG00000079348	NA	3: 1303862 ~ 1317290 (-)
ENSDARG00000012823	dlgap4b	6: 1831111 ~ 1874664 (-)
ENSDARG00000014280	dlgap1a	2: 29491314 ~ 29692825 (+)
ENSDARG00000079455	nlgn4xa	1: 32521469 ~ 32693950 (+)
ENSDARG00000030376	grin2bb	1: 45372562 ~ 45553602 (-)
ENSDARG00000077761	nlgn4xb	9: 55321322 ~ 55418196 (+)
ENSDARG00000070620	grin2db	16: 13179146 ~ 13388821 (-)
ENSDARG00000060532	adam22	16: 43152727 ~ 43284939 (+)
ENSDARG00000059340	dlgap2a	17: 24936059 ~ 25175560 (+)
ENSDARG00000043746	nrxn3a	17: 16906523 ~ 17447902 (-)
ENSDARG00000021352	gria1a	14: 34125855 ~ 34276574 (-)
ENSDARG00000010681	tjap1	13: 3979341 ~ 4134141 (-)
ENSDARG00000069378	pard6a	18: 22028674 ~ 22094102 (-)
ENSDARG00000077560	grin2cb	12: 31909346 ~ 32013125 (-)
ENSDARG00000071395	camk2g1	12: 35345830 ~ 35505610 (-)
ENSDARG00000061647	nrxn1a	12: 24342303 ~ 24640339 (+)
ENSDARG00000055459	dlgap3	19: 37458610 ~ 37492517 (+)
ENSDARG00000003865	pard6b	23: 19066696 ~ 19103855 (-)
ENSDARG00000027828	grin1a	21: 11468642 ~ 11502971 (+)
ENSDARG00000077710	nlgn1	11: 9564154 ~ 9985415 (-)
ENSDARG00000058868	apc	10: 1849874 ~ 1893095 (+)
ENSDARG00000044281	erbin	10: 15454745 ~ 15599149 (+)
ENSDARG00000002255	epb41l3a	24: 41931585 ~ 41986895 (+)
ENSDARG00000062325	shank2b	25: 14165447 ~ 14366077 (+)
ENSDARG00000062581	NA	--
ENSDARG00000070585	NA	--
ENSDARG00000062144	NA	--
ENSDARG00000074351	NA	--
ENSDARG00000076691	NA	--
ENSDARG00000094402	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, A to V)	embryo	baseline	shield stage, intact embryo, sectioned from animal to vegetal pole	GSM1448795	GSE59873
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, R to L)	embryo	baseline	shield stage, intact embryo, sectioned from right to left	GSM1448799	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf trunk)	embryo	baseline	late embryo, 1.67dpf, trunk, untreatment	GSM3672149	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000076691

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.