XLOC_010002 (gon4l)


Basic Information

Item Value
gene id XLOC_010002
gene name gon4l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 28994709 ~ 29024769 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019904
ACACCCGCCGTTTGTTGTGAAGCGGCGGGCTTAATAGAAAGATACCGATGGCTGCAGACATACGTTCCTGGGCTCAGAGACAGATTGAACATGGGATGGAAACGCAAGTCTTCTTCTCCAGAACCACAACCAAATCTTGTCAAACTACCAAAGAGGGAATCCCTCAGCAGATCTCCTAGCTCATGGAAGAGGAAGGCCTCTACACCCAGTAAAACAAAGAGCTGGACCTCCATTCAGTCCCTTTCTCCAGACAGGCATGTTGATCAGTGCAATGGCCAGGAGAAGATGTCCAGCGCAGGTCATGTTGAAGATGACAGTGACTGTATCCAGTCCTCTACTCCAGTTTCATCCCCTTTGCGGTCAGAAGAGGATGCGGAGCTGGGTCTGGTCATCACTGTGGATGAGGACAGATGTGAAGGGGAGGAATGGCTGAAGAAACGGAATGGAGTGAATATAAAGAAGAATGGAATAAATCAGACAGAAGGAGAGATCCCTCAGAAAGAGGATGGAGATGTGGAGAAGACTATGGAACAGCTAAGTGAAGAAGATGAGAATGAGGAAGAGCTCAGGAAGCTGGACAGAGATTTAACACTCAAATCTAAAAAACTCAACCTCTCCTCTATCAATGTTCGTAACATCATCCATGAGGTGGTAACCAATGAGCATGTTGTGGCCATGATGAAAGCTGCCATAAAAGAGACACAAGACATGCCCATGTTTgAGCCTAAAATGACTCGTTCTAAGCTGAAGGAAGCTGTTGAAAAAGGGGTGggCATGGGAAACTGGAACATCTCACCAATAAAGAAGGCAAATGACATTAAGCCACCTCAATTTGTGGACATTCCACTGCAAGAAGAGGAGGACTCCTCAGATGAAGAGTATTGTCCTGATGAAGACGAGGAAGATGAAACAGCTGAGGAGACGTTTTTGGAGAGTGATGTGGAAAGCACATCCTCCTCACCCCGCGGCATCAGACGTTTTCCTTCTCAAACGCCTCCCCATTGTGATGATGCCAGCAACAGCCCCAGACTGAAGCCCAGGCTGGCCCGGCACTTGAGGGTCGAGGCAGTGCCTATGGGTCCCCCTGCCCCTCCTCCTCAATCCTGTGGCCTTTCACGCTCTCTTAAGACCCTGGACCCCTTCATCGAGAAACTCCATGCTGTGGATAAAGAACTTGAACTAAGTCCTCTCTGCATGGAGCCTTATCAGGCTCTCAGTAGTGGTGGAGCAGGGGAGCCAGACGACAGTCTAGTAGCTTGTCGAACTCGGTCTAAGCGTCCATTGCGGGACGTCCCTCTTGATCAGCTGGAGGCCGAGCTCCGTGCGCCAGACATCACGCCAGATATGTATGATAATGTCTCCACACCAGAGGACCGTGAATGGACCCAGTGGCTGCAAGGACTCATGACATCTCATCTGGACAACGACGAAGAAGCTGATGAAGATGACGACCCCGAATATAACTTCTTAGATGATTTAGATGAGCCAGATTTGGAGGATTATCGAAATGATCGTGCTGTTCGTATTACAAAGAAGGAAGTCAATGAGCTCATGGAAGAGCTGTTTGAGACGTTTCATGATGAGTTGGCAGCCAATGAACCAGATGACGAAGGTCATGATGAAGATGAGGAGCGTGAAGAGGAGGCTAATGACACTCCACAATTCAATGTCCCTCAAGCTATTAGGTTTGAGGAGCCGCTGGCTCACATGTTGACAGCATGCAGGCGGACAGTTAGAGAGCAGCTGGATGCTTTACAGCAGCGGCGAGAAAACCAGGTCCGGACTACCCAGCATGCATCTGGGCCTGGCATGGTTTTTGTGCAGCCCAGCTGCCCTCTAGTTGTCACACCTGCACAGAGGATACAGCTGCAACAGCAAATACAGCAACATGTCCAATTACTGACCCAGGTCAGTATGCTGTGTGACCCAGTGGGGGCACTACAAACTGAAGCTCAAACCACCAAACATTTCTTGGGGGAGTTGCTGTCATTTGCAGAGCGGGCTGAGGAGGAAAGATCAGCAGTGAATCTGggttttaaaagtgtatttaggGTGTGTAATTTGCTTTCGTCCATCAACTTGTTGGAGGAGGTTAAGCAAAGTCCTTCTCTTTCGTGTCTTCCTCCCAAACCCAACCGGCATCACTCAGTTCATTCGTACCCTTTGCTTCCTGCTGGACTTGCATGGTTGTTCGCCACCCGCTCTGTCTTTCTGTACCCAGAACTTCTTCCACATTGCAGTCTGGATCCAGCCCTGCATCCTTCCCGCAGCAAACATTATTACAGCAAAGGAGAAGACGGTTTGTTAGTCCTGGGTTTAAAGCACTTCGCACAAACAGAGTTCCCATATCAACTGATTAGCCGATATCTGATTCGGCCCAAGCGTCAGGAGCAACTGCGTATGCGAGTAAAGGACATGGTATCCCCCAAATACCCACACAATATCATCAAGTATTACTGCCAGAATCATGTGGTTCCTCCTTTGCCGGTGGTGTGCAAACCTGTGGTGCATGGAGAGGAGCGCCCTCCTGTGGAGAGAGAACAGGAAGTCATGCCCAACTGGCTAAAGAAAAGCTTACCATTGATCCAGAAGTCAATTTGCCAGAGCGATTTAACGATGACTTCCACCACGAAATCTGCTAGCCTTCCTTTCCCTAAAGAAACACGCTACCCACAGTTCCTCCCTAAAGGTCTCTCTCTGCGTTTGCACCCATCACAAGTGGCAAGTCGCCCTTCCCAGCCCAAATCTCGAATTCTGCGTGCTTTTACTAACCGTACACTCGCACCGTTAGCTAAAGCTCCATCGTGTCCCACAGGTACAGGACATTTACTGACCAATATCTCCACACCAGTACTATTACTAGCCCAAGCGCCTAGCACTCCTATAAATGGGGTATTTCCATTAGTCCATCCCTCTTTGACCCCAGCCCATGGGACAGTCCCACTAAACGCTTCCTATCCTATTAACTTCCATTATCTTTCTCCAGAATTGGGTGCAAGTAATCCAGCACACCTTCCTGCGAATTTACCCCCCTCGGTAGTTCAGAAACCCCAATGTGACGTCCCTCTACTTAGTACTGGGACAGTCAAGACCCATGGCGTGCAGCAACAGACATCAGACAAACACAAGAAGCGTACCATGCCTAGAAAACTGGCCCCTTTGAGACCAGCCCCTCAGCTGCCCCGACTGCTGCCCCTTTCTTCTGGGAGTATTGGAAACATAAGCAACCCTGGCATCATTATAGATCAGCAAATATCCTTGAATGTCCCACACAACCTTCAATCAGATAACGTTATAGTTATCAAAGCCCATGAAAATGTCAACACACACAGAACGGTCCCTTCTCTGTCTCCGGATCTGGTTGTACAGTTAGTTCCTCAAACACAGGTTGCTGAAAACACCACAAGTTCCCTCCCTAGAAAGACAACACCGAGATCAGACGTTTCACAAACTGCAAAAGACATCCCTTCAGTTCAATCCAGTGGCGAGAATGGTCAAAGGACTGTATTTTCTCCTCAGACCGCAGCACCAGCTGCAGTGGACAGTTCTCAGTTTGTGCTGGTTCAGACTGTTTCTCCTACTGGGCCTCCTCAATTCCTACTTCTGCCCCAGGACTCCCTTGTCCTGAACCAACCTGCTTCACTTCCTTCTGAAGGCACATTGCAAAATCTTTCGCAGCAGACCTCTCATTTAGACATTTCTACTACCTCAACAGCCCTGAAGAACTCAGAGAAGACTGAGGTACATTTGAACAACCCAACCACATCATTGCCAGTTAGCAGAGAGGAAGATGGAGAAAGACAGGAGGTGGATGAGGAAATGGTTGGAGACAGATGGGAAGAGGAGATGGCCAGTGCTTTGTTTGGTAGTCCTCTTTTGGCGCTTTCTGAGTCCTCCTGCAGTCCTGACTCCAGCCCAGATGCAAGTATGGACAGTGGCAGTGATGCCATGGTGAGGGTGGAGATGGAAGATGGAGAGCTTCCTTCTGTACACTCAGCCTCCGCAACACAGGAAACACCGGATGTGCACAAACACAGCAGCGGAGATGAGAAAGAGCAACAGTCCAGTGGAGGAGAGAAGCAGAACAGTGGGAATGAGGAGGGACGGGCTGAGGAGAGCGAGAGTAGGAAAGATGAAGCGCAGGATGAAGATAAAGGAGGAGAAAAGAACGAGGATGGAGAAGGGGACGGAAAACGGGACGAGGGTGGAAGTGGTGATAAAGGAAGGGAGGAGAAGGATGGAGATGGAGAGAAAGATGGAGATGGAGAGCGagatgaggaagaggaggattTCGATGACCTCACACAGGATGAAGATGAGGAGGAAGTGATGTCATCGGCATCTGAGGAATCCGTGCTGTCTGTTCCAGAACTTcagGAGACGATGGAGAAGTTGACCTGGCTGGCATCAGAGAGGAGACTGTGCAGAGAGGGTGACTCAGAGGAGGACAATTCACCCACGTCCCCAACATCCCCGACTTCCCCCAACTCCCAGAACTCCCCAGCATCGCAGAATTCTCAGGAAGAGAACTCGGAGGATGAGGATGATGGGGCGATGAAGGGTGATGAGCTGGAAGCAGGGGAGGGAGAAGGCGAAAAGCTTCCTGAGGGGGACGCCCCAGCGGGTGATGATCCTCCACAGATCAGCGAGAAAGTAGGAGGCCGTGGAAGAGGTCGTGGTCGCCCTCCTCCGCGCAGTTTAAAACGTGGGCGACGTCAGGAACGAGGCAGTAAAGATGCCTCAAAGCTGCTCCTGCTGTATGATGACCACATCTTGGATAATGACCCAATGAGAGAAAGCAAAGACATGGCTTACGCACAGGCTTATCTCAACAGGGTACGTGAGGCTTTACAAGATGTCCCAGGAAAAGTGGAGGAGTTTTTAGGTCTGCTTTATGAGTTTGACCAAGCCGGAGAGAGCCACAGTGTTATAGAGTTGTTTGCCCAGCTTAAACAGCTGCTCAAGGACTGGCCTGAGCTGCTCAAGGACTTTGCTGCTTTCCTTTTGCCCGAACAAGCGCTGGAGTGTGGACTGTTTGAGGAGCAGCAGGCCTTTGAGAGGAGTCGGCGGTTTCTGCGTCAGCTGGAGATCAGTTTTGGGGAAAATCCTTCTCATTATCAGAAGATTGTCAGAGCCCTGCAGAGTGGAAGTCCTCTCAGTCCTGCTGGCATTGAAGAGCTGAAAACACAGATGGCCACTCTTCTGAAGGGTCACACACACCTTCAGGGAGAGTTTTGGATGTTTTTTGATGAGATGCGTCCACCACCAGCACGTCCAGGCCAGTTTGAAGAGGCTGTTTGGCCAGAGGATGTGGCCACTGGGACAGATGGAGAAGCAGGCGTGAGTGTGACCTCTAGAGGAGGTGTATGGGGAGGATTTGAGGAGGTCACGCTCCCCGATCTGGATGAGGATGAAGAGTCACACAAGATCAGACAGATAAGCAGCAGAAGCAAGAGGAGAAAAGAACTGCACACATACAAGGACTGTGATTGGCCTGAGAAAGATTGTTCCTGTTCCTGTCATGACTCCGTTCATGATGCCAAACATCGAAGGCATAAGAGAAAAGGATGCTTGCGTTGTCAGAGCAACAAGGCTGCTAATGGCTCAAAGGTGCTGAAGGGTCGTGATTCAGCATTTTCATCTGCCGATGCACAGTCtgaaagaggaggagaggaaaagGAAGAGGAAAGAGTGCTGGGAGAGGATGGAGAGGCAGAGAAAGAGCTTAAAGACGAGACTGGCAGTGGAGCTAACAGTCCACATCATGATGGGGAAGGGTCTGTGtgggagagagaagagagagccACTTCCTCCATTCCAGAGGAGCAAAACACACATAACCAAGATGATGAAGAAAAAACTGAAGAGAAGAACCACCATGCGTCACCAGAGAAGCACAGCCGAGATGAAGAGGATTCAGCTGAATCTGGACAGACAGAAGCCGCTCAGCAGAGCTCACTGAGCCCAGCCTTAGACGCACCCGTGTGTGCCAAAAACATCTCCCTCACACCCACTGGAGAGAGAGTCATCCTGTGGACCagGGAGGCTGATCGAGTGATCCTTACCACCTGTCAGCAGCAAGGAGCCAGTCAGAGCACATTCCAGGCCGTGTCCGAGCAGCTTGGCAACAAAACAGCCAGCGAGGTTTCAAGGAGATTTCGGGATTTAATGCGTCTGTTCCACACGTCAGCTTCTCAGGCCAGTTCAGAGGACGAGGCTGCAGAGCAGCAGTCGGCCACTGATGAAGAGCAGGACTGAACCCTGCCTTCTGACTGCTTCATTAAAAAATACTTATGCAGTTCTTCTTACACTGACACCTGCCAAAGATGTGTTTTAAGCATGGTGGAAAAAAAGGTTCTGTTGGCCTCCTTTTAACATGTGAAGTATAAATCCATCATATGAAGGTGCTATCCGTCACGTTCTAAACACAAAACCAACATAATTATTGAAGAAATGTAGCACAAACTGCTCCATTTTATCCCTGATTATTGTATTGTAATTGGACAAATGACAGGCTCTCACTTAGCACAAAATGAGATGTTTGATAGCAGAGAAATTGTAGAGCACTAACCAGCATATTCTCACCTCCATGGTTTCTGACAGGTTGATTGTATATTCTGTGAATATGTGAACATATGGCATGTACAGTATTTTTATATCAGGgtggttttgttgtttttattttgcttcaGATGTTAGTTTTGAGAATGGCGCACAGTTGTTGGTAATCCAAATAATAAAATGACTATTTATACC
>TCONS_00019905
GAGAAAGCAAAGACATGGCTTACGCACAGGCTTATCTCAACAGGGTACGTGAGGCTTTACAAGATGTCCCAGGAAAAGTGGAGGAGTTTTTAGGTCTGCTTTATGAGTTTGACCAAGCCGGAGAGAGCCACAGTGTTATAGAGTTGTTTGCCCAGCTTAAACAGCTGCTCAAGGACTGGCCTGAGCTGCTCAAGGACTTTGCTGCTTTCCTTTTGCCCGAACAAGCGCTGGAGTGTGGACTGTTTGAGGAGCAGCAGGCCTTTGAGAGGAGTCGGCGGTTTCTGCGTCAGCTGGAGATCAGTTTTGGGGAAAATCCTTCTCATTATCAGAAGATTGTCAGAGCCCTGCAGAGTGGAAGTCCTCTCAGTCCTGCTGGCATTGAAGAGCACGTCCAGGCCAGTTTGAAGAGGCTGTTTGGCCAGAGGATGTGGCCACTGGGACAGATGGAGAAGCAGGCGTGAGTGTGACC

Function

symbol description
gon4l Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to act upstream of or within B cell differentiation. Located in nuclear body.

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0030183 B cell differentiation biological_process
GO:0048570 notochord morphogenesis biological_process
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0003712 transcription coregulator activity molecular_function
GO:0003714 transcription corepressor activity molecular_function

KEGG:

id description
ko03000 Transcription factors

ZFIN:

id description
ZDB-GENE-070117-2447 Predicted to enable transcription coregulator activity. Acts upstream of or within notochord morphogenesis. Predicted to be active in nucleus. Is expressed in intermediate cell mass of mesoderm and pronephros. Orthologous to several human genes including GON4L (gon-4 like).

Ensembl:

ensembl_id ENSDARG00000005867

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019904 False 6756 mRNA 0.49 31 28994709 29024769
TCONS_00019905 True 469 processed_transcript 0.52 4 29016936 29019138

Neighbor

gene id symbol gene type direction distance location
XLOC_010001 si:dkey-239n17.6 coding upstream 3333 28903774 ~ 28991376 (+)
XLOC_010000 chtopb coding upstream 107550 28881235 ~ 28887159 (+)
XLOC_009999 zgc:171704 coding upstream 197844 28792158 ~ 28796865 (+)
XLOC_009998 trim33l coding upstream 204292 28764017 ~ 28790417 (+)
XLOC_009997 s100v1 coding upstream 234703 28754403 ~ 28760006 (+)
XLOC_010003 gpatch4 coding downstream 523 29025292 ~ 29030674 (+)
XLOC_010004 nes coding downstream 19044 29043813 ~ 29057849 (+)
XLOC_010005 NA coding downstream 186593 29211362 ~ 29230847 (+)
XLOC_010006 NA coding downstream 221111 29245880 ~ 29250848 (+)
XLOC_010007 hapln2 coding downstream 279202 29303971 ~ 29308947 (+)
XLOC_009994 NA non-coding upstream 327376 28660395 ~ 28667333 (+)
XLOC_009989 CR936250.1 non-coding upstream 606546 28388046 ~ 28388163 (+)
XLOC_009987 NA non-coding upstream 623379 28270015 ~ 28371330 (+)
XLOC_009986 NA non-coding upstream 944681 28049554 ~ 28050028 (+)
XLOC_009984 NA non-coding upstream 1121342 27839927 ~ 27873367 (+)
XLOC_010014 NA non-coding downstream 566350 29591119 ~ 29600668 (+)
XLOC_010018 NA non-coding downstream 696858 29721627 ~ 29813252 (+)
XLOC_010019 AL928927.1 non-coding downstream 878875 29903644 ~ 29908970 (+)

Expression


Co-expression Network