CI01000056_01531219_01585175 (MCF2L2)


Basic Information

Item Value
gene id CI01000056_01531219_01585175
gene name MCF2L2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1531219 ~ 1585175 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000056_01531219_01585175.mRNA
GGAAGAGGAAAAGATGGATCTCCTATCATCACCTTCCCAGAGTTCTCAGGTTTTAATGAGGTGACAGACGAAGATTTCGTTAATGTTGTCACATACCTGACCAGCATACCAAGCATGGATGCTGCTAGCATCGGCTTCATCATCATCCTGGACCGCAGGAAGGACAAATGGAACTCAGCAATCACTTCTCTGGCACGGATAGCGGGCTCCTTCCCAGGAAATCTGCAGCTTGTTCTGGTTCTCAAACCTTCACGCCTCCTCCAGAGGGCCATTGCTGATGTCAGTATGCGGTTACATAGGGATGATTTCAAATTGAAGGTACCGATAGTTATGCTAAATTCCCTGTCAGACTTGCACGGCTACATTGACAAAGGCCAGCTGACCTGTGACCTGGGGGGAACCCTGGACTATTGCCACAGTCAATGGATTCACCATCGCACAGCCGTTGAGAACTTTGCGTTAACAGTGAAGAGCACAGCACAGATGCTGCAGCAGTTTGGAATTGACCTGGCAGAAACTGAACTTCCCAATGATGTGCAGTGCACTAAAGATTTGCTTATCACACACACCGAAAAACACGATAAGCTCAAGGATGAGCTAAAATTGGCCGTAAAACAAGGAAATACCCTGCTGTCCTGTATCAAAGACCAGGCCAGCAAAACCGAGAGCCGCATTTTGAACCCAGATGAGGTAGAGAACCAAACAACTGTTGAAAGGTTGTTAGCGCAGCTCGATGAGACGGAGAATGCGTTTGAACAGTTCTGGTCGAAGCATCACCTCAAATTAGAGCAGTGTTTACAGTTACGGCACTTTGAGCAGGACTTTAGAGAGGTGAAAGTTTCTCTGGACGGCCTGATGGAAGCCTTATTGGGGCTGTCCGACACCGGGGACTGTGTGGCTCGAGTCGATCACCTACTGGGGGATCTGAAAACCTTGGAGGACAAAGCTCAGGAGTCCTTGGAGAAAGCTCAGCTTCACGCTCAGCATGGGGACCAGCTCATTCAAAGTAACCATTACGCCGTAGACTCCATCCGCCCAAAGTGTGTCGAACTGCGTCGGATCTGCGATGACTTCAGCAATGAGGCAAAAAAGAAACGTGACATTCTAACCAAATCACTTGAAATCCACAAAAGAATTGACGAGGTGATCCAGTGGTGTGAGAGTGGAGTGTATCTGTTGGCCTCTCAGGCTGTAGACAGATGCCAGACCCAGGAAGGTGCAGAAGCAGCACTGAAGGACATCGAGAGGTACATGAAAACAGCCAAAGATCAGCAGCTCAGTCATCTCAAAGACCTCAGCAACCAGTATGAGATCGCCCTCTCAGAGCTGGTCAAGAGCAAAACCCAAACTGCACTTAAAAGGCTGGATGACGTTCAAGAGATGTTTGAGAAAAGACATGCAAGTCTGAAAAAGCTGTCTGCAAAGCAAGCAAGGCCGGTGCAACCTGTTGCACCTCGACCAGAATCATCACCAAAACGCACTTCGCCTAAAATCCCGCATTCTACTCCACCTGCATCAAATCGCAAAGCTGCAGATAACTCCTGCGCCAATAAGCAGCCCAGTGACGCAGAGCTGGCAAAAAGGAAAAATATTCGCAAAGCCAAAGGTGGCATCAAGATTGAAGTCATGCATGAAGGAGGCCAAGGGGGGTCGAGTCATGTTCTCATAAACAATGAAACTGAAGAGTCGCTTTCAAACAGACGCAGCCACATAATGAATGAATTGATTGAGACGGAGAGGCTGTACGTGGAAGAGCTGCAGAGCATCATAGAGGGATATGCAGCTGCACTGGATGACCCCGAGCTGATCTACCTGATCCCACCGTCTTTGGAAAACAAGAAGGAAGTACTCTTTGGCAATCTGCCAGAAATCTACGAATTTCACCAGAAGACATTTCTTAGAGAGCTGGAAAATTCTGCAGAAAAGCCAGAGTTGGTAGGAGTATGCTTTTTAAAGCGGAAGGAAGAGTTACAGATTTATGAGAAATATTGTCAGAATAAGCCACGCTCTGAGGCTCTGTGGCGGCAGTGTGGGGACAGTATGTTCTTTCAGGAGTGTCAGAAAAGGTTGGACCACAAGCTTTCTTTAGATGCGTATCTGCTAAAGCCTGTGCAGAGAATCACCAAGTACCAACTGATGTTAAAGGAGATGTTGAAGTGCAGTAAGAACTCAGAGGGCACCGCTGAGCTGGAGGAAGCTCTGGCCACAATGCTAGACATTATCAAATCAGTCAATGACTCCATGCATCAGATTGCCATCACTGGTTTTGAGGGCAATCTGAATGATTTGGGAAAACTGCTCATGCAGGGCTCGTTTAACGTTTGGACAGACCATAAGAAAGGTCACAGTAAAGTGAAAGACTTGGCACGCTTCAAACCCATGCAGAGACATCTCTTCCTCTACCACAAAATCCTTTTGTTCTGCAAGAAACGTGAGGAGACGTCTGATGGTCATGAGAAATCCCCTTCCTACAGTTTCAAGCACTCATTAAAGATGAGCTCAGTGGGAATCACAGAAAATGTAAAGGGAGACATCAAGAAGTTTGAAATCTGGTACAATGGCAGAGAGGAAGTTTACATCGTTCAGGCTCCTTCCATGGAAGTGAAGAACACATGGGTGTCAGAGATCCGCAAAGTCTTAACAAGCCAGCTGGAGGCCTGCCGAGAAGCCAGTCAACTCCATCAGAAGATTACAGAGAACATCTACCATGCTCCCATGAGAAATATGCGCAAAACAGCTCTCCGACAGTCGGATTCTTCTAGTCCTGAAACAGGCTACAGACGTGACACAGGCCCAAATATGCGTCAGAAACGAGGATGGAGTCAACGGCGTCTGCCGTCAATGGATGCTGAGGATTTTGAGACCATTCCTTCTAGTGCTGAAGAACTCTCCATTTCCTCAGATGGAGAAGATGAAGGACATAACAAAAACGGGGATAATGAGCGCTATCAGGTGCAGCTGACGTACGAGTCAGGTACCGCTCAGGATCTTTCCGTGGAGGCGGGGGAGTTAGTACAATTCCTAGAAGAGTCGGAGAATGGCCAC

Function

symbol description
mcf2l2 Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within intracellular signal transduction. Predicted to be located in cytoplasm. Orthologous to human MCF2L2 (MCF.2 cell line derived transforming sequence-like 2).

GO:      GO:0005089, GO:0035556, GO:0005085, GO:0035023

KEGG:

id description
K20685 MCF2, ARHGEF14_21_22; guanine nucleotide exchange factor MCF2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000056_01531219_01585175.mRNA True 3045 mRNA 0.48 26 1531219 1585175

Neighbor

gene id symbol gene type direction distance location
CI01000056_01489840_01520989 ECT2 coding downstream 9866 1489372 ~ 1521353 (-)
CI01000056_01462807_01467593 NA coding downstream 63626 1462048 ~ 1467593 (-)
CI01000056_01292701_01294007 NA coding downstream 237145 1292643 ~ 1294074 (-)
CI01000056_01211952_01214139 NA coding downstream 317080 1210867 ~ 1214139 (-)
CI01000056_01120219_01167748 NA coding downstream 363419 1119817 ~ 1167800 (-)
CI01000056_01626198_01642589 SLC4A10, SLC4A10A coding upstream 40673 1625848 ~ 1642589 (-)
CI01000056_01671336_01676525 NA coding upstream 85730 1670905 ~ 1676630 (-)
CI01000056_01685272_01692934 PSMD14 coding upstream 100073 1685248 ~ 1694120 (-)
CI01000056_01864934_01867946 LGSN coding upstream 279710 1864885 ~ 1868212 (-)
CI01000056_01875964_01880351 NA coding upstream 290133 1875308 ~ 1880351 (-)
G243289 NA non-coding downstream 53386 1477580 ~ 1477833 (-)
G243225 NA non-coding downstream 124099 1406892 ~ 1407120 (-)
G243220 NA non-coding downstream 141853 1389143 ~ 1389366 (-)
G243201 NA non-coding downstream 227863 1298941 ~ 1303356 (-)
G243064 NA non-coding downstream 254157 1270347 ~ 1277062 (-)
G243303 NA non-coding upstream 87356 1672531 ~ 1672744 (-)
G243307 NA non-coding upstream 114912 1700087 ~ 1700556 (-)
G243314 NA non-coding upstream 130678 1715853 ~ 1716133 (-)
G243267 NA non-coding upstream 149802 1734977 ~ 1737418 (-)
G243323 NA non-coding upstream 186864 1772039 ~ 1772994 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location