CI01000056_01671336_01676525


Basic Information

Item Value
gene id CI01000056_01671336_01676525
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1670905 ~ 1676630 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000056_01671336_01676525.mRNA
AGCCTGGCACATGCGGCAGAGGGCATGAATATCCATTCAAAGCAGTATGTCTGAGGTCTGAAGTTCTGAACCCAGGTTGAACTCCAAGAACTTTCTCAGAGAGTTATGCACCTGCAACAACTCCCCTCACCGTCCGCACTGGCCAACAAACCGGTGCGTGTGGACAATGATTTTACGCACATCGCCGCCGCGGGGAACACTTTGGAGAACGAGCCACCTTTGAAAAGACTCTCCACAGGGATAAGAAACCCATCAAACGCTCTGGACTACGTCTCCGCCGCACGGGATGACAGTGAAAGCGCGGACAAGTGCAATTTACCTGAATCAAGTCAAGCGCGGACAGATTTCGCCTCGTCTTCAGCAATGTTCTCATATTCAGGTCAGCATGTAGTGCCCGCGCTCCCGGCACTCTACAGTCACTACATGACACCTCACCCGGTCATCAGCAACGGGCCGTACAATGGGTTGAGCTACGCGTACTCACAGCCGTACGGACAAACTTACACAAACGCCGCCGTCTATCCTTTCCCCTCGGTGCCCGGTAAAGCGCAGGTTCACCTGTGTAACCGGGGGCTGTGGTTCAAATTCCACAGACACCAAACAGAAATGATCATTACTAAACAGGGACGCCGGATGTTTCCGTTTCTTAGTTTTAGTGTTTCTGGTCTTGACCCGACGTGCCATTATAATATTGTTGTGGATGTGATTCTGGCGGATCCAAACCACTGGAGGTTCCAGGGCGGAAAGTGGGTTCCTTGTGGCAAAGCGGACACTAACGTCACTGGTAAACTCCATGTTACGGGAAACCGAGTATACACGCACCCGGACTCTCCAAACACCGGCGCGCACTGGATGCGTCAGGAGATCTCTTTCGGAAAACTGAAGCTGACAAACAACAAAGGAGCTGCCAATAACTCCACTCAGATGATCGTCCTACAGTCTCTTCAAAAGTATCAGCCGAGAGTGCATGTGATTGAAATAAACAAGAGTGGAGATGAAGATGCAAGTGATCCTGATCGAGTACAGACATTTACCTTTCCCGAGACGCAATTTATAGCTGTCACAGCTTACCAGAACACAGATATAACTCAACTAAAAATTGATCACAATCCATTTGCTAAAGGATTTCGGGAAAATTATGATTCTTACAGTGGCTGCGACGCTGACCGACTGACCTCCACACCTGGCGACTCTCCACACTCTCAGTTGCTGCCTGGCTCACGGTACGCAATGACAAGCACCTTATTCCAGGAGCAGTTTGTCAACAGTTACACAAAATCCTGTTTTACAACTCTTAACCCTGACTCTGTCACTACTGACCGACCAATCACGCTTACTAACAGCCTAACGAACCAATCCCAAGAGAGCAGCACGGCCTCCGGACAGCGCTGGTTTGTGTCTTCCTCAGCCTCTCCATCATACGAAACTGATGTTAACGCAGCAGCTCTGCTCTCTTACACCACGGCAGGGGTCAAAGGTCTGCCTTTTACTAGTACTGGTGGCACTAGTAACAGTTTGGATTACTACACCAGTGCTGCTGGATGGGATTCAAAAGGTTTGCTAGATAACAGCAGTAAAACCATCTCAAATCTGCCTGACTGGGTTATGGATGTGACACATGAAAGATCCACACAACCGAATTACATGCCCGAGGATGGAGATATGTTGGAAATAGACAGATCTTCGCTGGAGGTTTCTGAGGAGCTTGAAGGAAAAGATGCCGCGGATTCGACATGGACTGAGACTCAATCTTCCATTAAATCCAGTGATTTAAGGATTTTGGAAGAAGCACAACAGAGAAATTCCTCTGTCACTCCTGATTCAGATGTTCAGACAGCAAAAGACATTCAGGTCTCACAGAACAGGGAAAGAAATGTGATCAAAGAATCTGACTTTTTTCATTTTAACACTCAAACGTAAACCTGCCTGGGCTGAGTGTGCAATTAAAATATTGTTAGTATAGAAATAACTTTATAATGATGATTTATGTATACAATATTTATTTATTTTCATGTTAATGACACTGCACCATTGCTGAACCATGTCTGAACTGAGTATTCTGTGTATTTTTTTTCAGTGGTGGTAATTTGAAAAAAAAAGAAAGGAAAAAACATACATTAATAGACCGTCATATGAGTGTTTGTTAAAACATACAGCCCAAATATAGGCTAATGAATCTAGATAAAGTGTTATTAAAATCACAACAGTGTTTAACATGGGAATTTAATGACCATGAACTATCAAAACTGCAAGTTTTTTGATTAGATGCTTATTGTAAAATATAGAACATGTCGATGTGAAGTCATGACATTCTGCTGGTGTCAGAATGTTTGATGTTCAGCCTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000056_01671336_01676525.mRNA True 2351 mRNA 0.45 6 1670905 1676630

Neighbor

gene id symbol gene type direction distance location
CI01000056_01626198_01642589 SLC4A10, SLC4A10A coding downstream 28316 1625848 ~ 1642589 (-)
CI01000056_01531219_01585175 MCF2L2 coding downstream 85730 1531219 ~ 1585175 (-)
CI01000056_01489840_01520989 ECT2 coding downstream 149552 1489372 ~ 1521353 (-)
CI01000056_01462807_01467593 NA coding downstream 203312 1462048 ~ 1467593 (-)
CI01000056_01292701_01294007 NA coding downstream 376831 1292643 ~ 1294074 (-)
CI01000056_01685272_01692934 PSMD14 coding upstream 8618 1685248 ~ 1694120 (-)
CI01000056_01864934_01867946 LGSN coding upstream 188255 1864885 ~ 1868212 (-)
CI01000056_01875964_01880351 NA coding upstream 198678 1875308 ~ 1880351 (-)
CI01000056_01901745_01905615 MRPL4 coding upstream 225086 1901716 ~ 1905615 (-)
CI01000056_01906917_01907477 NA coding upstream 230216 1906846 ~ 1909191 (-)
G243289 NA non-coding downstream 193072 1477580 ~ 1477833 (-)
G243225 NA non-coding downstream 263785 1406892 ~ 1407120 (-)
G243220 NA non-coding downstream 281539 1389143 ~ 1389366 (-)
G243201 NA non-coding downstream 367549 1298941 ~ 1303356 (-)
G243064 NA non-coding downstream 393843 1270347 ~ 1277062 (-)
G243307 NA non-coding upstream 23457 1700087 ~ 1700556 (-)
G243314 NA non-coding upstream 39223 1715853 ~ 1716133 (-)
G243267 NA non-coding upstream 58347 1734977 ~ 1737418 (-)
G243323 NA non-coding upstream 95409 1772039 ~ 1772994 (-)
G243250 NA non-coding upstream 127489 1804119 ~ 1817371 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003931 tbr1a coding NC_007122.7 CM002895.2 10812949 ~ 10828539 (-)