CI01000056_01906917_01907477


Basic Information

Item Value
gene id CI01000056_01906917_01907477
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1906846 ~ 1909191 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000056_01906917_01907477.mRNA
ACTTTGTGTTTTTATTTGAAGAGACTGAAAACAGCACAAAAAACTATACAAAAATCCCGTTCCAATTTCAGTTTCTTTTAACCAGTCAGGTCCCTCGTCTGACTCACAGCACAGACAAGAAAAAGGTCCATTGTCAGTAGTGTAGTGATGTATTAAGCACTGCTCACACAGAAGTCACTTTCAAACCAAGCAACTCGAACATTAGCAGAATCTACATGGAAATCTTTTTTTGTCCTCACACGAAACTCCAGAACGTGTGGATTCCTATTGAAATGACTAGATTTTGTGTATGAAATTTCACTGAGCAACAGTAATTGTGTCTGCCCCTACAGGGATGCAATTGTTAGAAACTACTTTTTAAGTCATCTCTCTGTCTCATTGTAATTAATATACAGTGATAAATGATAGTTAAAACTAAATGTATTATTTTTGTTTGATATTGACTGCTGTTTGGGGACTATATATATTTATATATATATATATATATATATATATTTGCTGGACTGTAACAGCCTTAATATATAGCCTGCTTCTACTTTATCTTCTTAATGACTTTAATGGTTTCACCCAAAAATGAAAATTCTGTCATTTACTCACCCTCATGTTGTTCCAAACCCATAAGACTTTCGTTCATCTTCAGAACAAAAATGAAGACATTTGTAATAAAATCTGAGTGATTTCTGTCCCTCCATTGACAGCTACGCAACTACCACTTTGACGCTTCAAAAAGTTCATAAAGAGATCGTAAAACGAATCCATATGAATCAAAAGGTTTAGTCCAAATTTTCTGAAGAGACTCGATCGCTTTATATGATGAACAGATTGAATTTATTCACATATAAACACTGATCAGCGAACATAAGAGAAACTCAATAGTACTTGCTTGATGCGTGAGAACAAACCTCATTGGTTCTTGTGGAAGCTCAAACGTGCTGCGTAACAAGAGAATGAACCTCATTGGTTCTCGCATGTCAAGCAAGCATGTTTGAGCTTCCGTTTACCACAGCTGATGCGAGTTGATGAATGTTTATATTTGAACAAAAGTCTAAATTCAATCTGTTCATCATATAAAGTTATCGTGTCTCTTCAGAAAATTTGGACTAAACCGCTCAATTCATATGGATTAATTTTCTGATCTCTTTATGAACTTTTTGAAGCGTCAAAGTAGTAGTTGTGTAGCTGGCAATAAAGAGACAGAAATCTCTCAGATTTCATTAAAAAAGATCTTCATTTGTGTTCCAAAGATTAACGAAAGTCTTACGGGTTTTAAACGACATGGGGGTCATAATTAATGACAGAATTTTCATTTTTTGAGTGTACTACGCCTTTAAATCAAGTGCAATATATACATATCTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATAATTAAATTTTGTTCCTGAAATCCACCCTTCTGATGGGATCGGATAATCTAGATTTTTTGGGGGGATCAAAGGTATCCCAATACTATTAAAAAGTTTTGAACAACACATACTGAAGGTTTGATCTAGATTGGATTAAGTGTTCTAATCTGATTTCAGAATCCTTTTTTTTCTTTCAAACCCATTTTCATGATTTGATCCAATCCACTATCTGAAATATGTGAAAATTTCTTTTGCTGGGCTCTGATGATACTGAAATAATTTATTTTTTTGATTGCAGGTGGGTTACAGATGTAGCTGGGGTCTGGCAGCAGTGACCATGGCGCTGTGCTGGGGTGGTTTGTTGGTGTTGGCGGCCCTCTCCCAGGCCCTGGGCTCTCCGCAGCACTCAGAGGAGCCTTCCGTGCCAGATGAATGGGTCCTGCTACATGTCGTGCAAGGCCACATAGGGGCGGGAAACTACAGCTACCTGCGTCTTAACCACGAAGGACGCATTATCCTCCACATGCAAAGCCTTAAAGGAGATGCAGATCTCTACGTCTCTGACAAGACGCTGCGGCCAAACTTTGATTCCTACAAGCTTCAGTCTACCACCTGTGGCCAGGATGTGGTAGTCGTCCCAGGGGATTTTGTAAGGCCTGTTGGAATCGGGATCTACGGACATCCCTCCTACATGGAGAGTGAGTTTGAGATGAAGGTGTTTTACGACCAGACAGCACTGACAGAAGATGAAATGGACAAAAACTCTTATCCTTCAAATGAGACTCCTGGTCAGTCTCAACACTCTCAGGGCCCTGAGGATGTGATGGAAGAAGAGGAATCCATCCTGTGGACTATTCTAATTGGGATTCTTAAGATCATACTTGAAATTTTGTTTTGATTTTGATGTGCCAGGTGCCATAATACCACATTTGCCACAATGAACTGTTCTTCCCGTTTAGATCAAATAAA

Function

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000056_01906917_01907477.mRNA True 2346 mRNA 0.38 1 1906846 1909191

Neighbor

gene id symbol gene type direction distance location
CI01000056_01901745_01905615 MRPL4 coding downstream 1231 1901716 ~ 1905615 (-)
CI01000056_01875964_01880351 NA coding downstream 26495 1875308 ~ 1880351 (-)
CI01000056_01864934_01867946 LGSN coding downstream 38634 1864885 ~ 1868212 (-)
CI01000056_01685272_01692934 PSMD14 coding downstream 212726 1685248 ~ 1694120 (-)
CI01000056_01671336_01676525 NA coding downstream 230216 1670905 ~ 1676630 (-)
CI01000056_01914048_01917011 PRPH coding upstream 4857 1914048 ~ 1917011 (-)
CI01000056_01929886_01934773 SUOX coding upstream 19807 1928998 ~ 1934773 (-)
CI01000056_01941102_01951921 MCRS1 coding upstream 31280 1940471 ~ 1951921 (-)
CI01000056_01981547_01984285 NA coding upstream 71735 1980926 ~ 1984285 (-)
CI01000056_01985772_01986304 NA coding upstream 76581 1985772 ~ 1986524 (-)
G243339 NA non-coding downstream 70236 1836314 ~ 1836610 (-)
G243250 NA non-coding downstream 89475 1804119 ~ 1817371 (-)
G243323 NA non-coding downstream 133852 1772039 ~ 1772994 (-)
G243267 NA non-coding downstream 169428 1734977 ~ 1737418 (-)
G243314 NA non-coding downstream 190713 1715853 ~ 1716133 (-)
G243253 NA non-coding upstream 16842 1926033 ~ 1926510 (-)
G243258 NA non-coding upstream 65552 1974743 ~ 1976440 (-)
G243358 NA non-coding upstream 140745 2049936 ~ 2051757 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003937 C11H6orf120 coding NC_007122.7 CM002895.2 11332652 ~ 11336986 (-)