G243253


Basic Information

Item Value
gene id G243253
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1926033 ~ 1926510 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU276076
GTTGGTAAGATCAGTGCATAATTTTATTTGATTTATACACAGTTTTTGGACAAACCATAAAATATGCCTTAAAAATCTAAATTGATCATTGCAGCATCAATTATGTGGTTAACATGATGTGAAGAACAAATGTTTACTACACATATTTTCTAAACTGCAATAGACAAACTGAATGCTCACTTGATATGTGTCCCCTCTAAAGCCTCAACTTTACATTTCTGACTAGAACTGATAAATAAATTGGTAAAAGTGATCTTAATATTCCTCACCTTCCTCTTCTCCTTCTCCCTCGACTGAATCTACTCCCACCTCCTCATAATCTTTCTCCAGAGCTGCCATGTCTTCTCTAGCCTCAGAGAACTCGCCCTCCTCCATACCTTCACCTACATACCAGTGCACAAAGGCACGCTTAGCGTACATCAGATCAAACTTATGATCAAGCCTGGCCCAAGCCTCGGCGATAGCAGTGGTGTTGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU276076 True 478 lncRNA 0.40 1 1926033 1926510

Neighbor

gene id symbol gene type direction distance location
CI01000056_01914048_01917011 PRPH coding downstream 9022 1914048 ~ 1917011 (-)
CI01000056_01906917_01907477 NA coding downstream 16842 1906846 ~ 1909191 (-)
CI01000056_01901745_01905615 MRPL4 coding downstream 20418 1901716 ~ 1905615 (-)
CI01000056_01875964_01880351 NA coding downstream 45682 1875308 ~ 1880351 (-)
CI01000056_01864934_01867946 LGSN coding downstream 57821 1864885 ~ 1868212 (-)
CI01000056_01929886_01934773 SUOX coding upstream 2488 1928998 ~ 1934773 (-)
CI01000056_01941102_01951921 MCRS1 coding upstream 13961 1940471 ~ 1951921 (-)
CI01000056_01981547_01984285 NA coding upstream 54416 1980926 ~ 1984285 (-)
CI01000056_01985772_01986304 NA coding upstream 59262 1985772 ~ 1986524 (-)
CI01000056_01994813_02008348 NA coding upstream 67809 1994319 ~ 2008348 (-)
G243339 NA non-coding downstream 89423 1836314 ~ 1836610 (-)
G243250 NA non-coding downstream 108662 1804119 ~ 1817371 (-)
G243323 NA non-coding downstream 153039 1772039 ~ 1772994 (-)
G243267 NA non-coding downstream 188615 1734977 ~ 1737418 (-)
G243314 NA non-coding downstream 209900 1715853 ~ 1716133 (-)
G243258 NA non-coding upstream 48233 1974743 ~ 1976440 (-)
G243358 NA non-coding upstream 123426 2049936 ~ 2051757 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) tuba5 LOC106572477 misc NC_048580.1 CM023234.2 46185921 ~ 46193971 (+)