CI01000057_00459703_00467870 (ABHD6A, ABHD6)


Basic Information

Item Value
gene id CI01000057_00459703_00467870
gene name ABHD6A, ABHD6
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 458943 ~ 467870 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_00459703_00467870.mRNA
GATGGATTTGGACGTGCTGAACATGTTCATCATTGCCGGAGGGACGCTGGCGATCCCCATACTGGCTTTTGTGGCCTCCTTCCTGCTCTGGCCTGCAGCTCTTATTAAAGTTTATCACTGGTATTGGCGCAGAAGGCTGGGAATGCAGGTAAATTATGCAGAATATGAAGGATATCGCTTCTGTTACTCTCACAGAGGGAATCCAGGCACACGTCCGTCCGTCCTCATGTTACACGGATTCTCTGCACACAAGGACATGTGGCTCGGCGTGTTTCTTCCTAAAAATATGCACTTGGTGTGTGTTGACATGCCGGGACATGAAGGAACGACACGCACCAGTGCTGTGGATTATTCCATAGAGGGACAAGTCAAACGGATACATCAGTTTGTGAAGAGCATCGGCTTGAACAGAAAGCCTTTCCATTTGATCGGCACATCTATGGGTGGAAACGTAGCAGGAGTTTATGCTTCCCGTCACCCGTCTGATCTCTGCGGCGTCACTCTCATCTGTCCAGCAGGTCTTCAGTATCCCACTGAAAGTAAGTTTGTTGAGCGTTTGAGGGAACTGGAGAAAACTCAGGACAGTGACGGGATCCCGCTGATTCCCTCTACTCCAGAGGAGATGGAGGAGATGCTCAGACTGTGTTCCTTTGTGCGCTTTAAGATTCCTAAACAGATTCTTCAAGGTCTGGTTGACGTTCGCATTCCAAACAATGACTTCTACCGAGAGTGTTTTATGGAGCTTGTTGGAGAAAAATCCAGACACTCTTTACATGAGAACATGCATCTCATCTCAACTCCTCTGCAAGTTATTTGGGGGAAAAATGACCAGGTGTTAGACGTGTCCGGGGCTTCAGTTCTGGCCGAAGCCGTTCCAGGATCCCAGGTTCATTTGCTAGACAACTGTGGTCATTCTGTAGTGATGGAGCGGCCGAGGAAATCCGCCCAGCTCATCATGGACTTTATCATTGCACAACAGAACGCAGGAGTCAACAAGAAACTTTCCTAAATCTGAACTCTATATCTTTAATATGTGGCGTTGTGGTTGTGCTAAAGGTTAAGGATCTCAGCTACAAACATAAAGGTTGTTGAAGCAGAAACTGGAAAGTTTCAGACATCACAGTCCTGCTACTCAAAGTATAATTCATACAGTTTGTGCTCCTGAAAGATGCTTTGGATGAAAGGCTCTTTTAAAAGTAACAATATTTGATTTTACAGTGTGTAAATATCCAGTAAATGTTATTTTTGTAGTGAACGCTCAGGGTCGCACACTAACCGCTGAGTTGAAAAGCACTTCAGAAGCTATGCAGATATAGATCAGTGTCCTGCAGACAGTATCGATTTCTATTAAACTTAGATTAGACCAAAAACGGTTGTTTACTATTTTATATATATATATTTATATAATTATAATTTTCCTCTGACACCATTCCATATTTGAAGAGACCTACCTAAACAGCTTTTCTGTGCATCATAGGCACTTTCCTGAACTAACTGAATGCCCAGAAATGCTGTCTGTATACTTAAATTGAGACGCAGTGTATATGTCTATCCCTTTAGTTGTTTACCATGTTTTTTGCCATTTTAACATGATTTAATGTTGACTTTGAAACTTCTGTGACATTTACGTCACTTTCTTTCTACTATATAGAGTTCTTACAAATCAGTTCTTGCTGTTTTAACCTTGTACAAATCTTTTGAAAATGTAGTTTGGGAATTATGCAAACTATTTCATGACTTTAGCATAGTGTTAAAATCTGGTTAATAAA

Function

symbol description
abhd6a Orthologous to human ABHD6 (abhydrolase domain containing 6, acylglycerol lipase).
abhd6 Enables acylglycerol lipase activity. Involved in acylglycerol catabolic process. Predicted to be located in late endosome membrane and lysosomal membrane. Predicted to be integral component of membrane. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in GABA-ergic synapse; glutamatergic synapse; and mitochondrion. Predicted to be integral component of postsynaptic membrane.

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K13700 ABHD6; abhydrolase domain-containing protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_00459703_00467870.mRNA True 1769 mRNA 0.42 8 458943 467870

Neighbor

gene id symbol gene type direction distance location
CI01000057_00420698_00421063 NA coding downstream 37880 419986 ~ 421063 (-)
CI01000057_00409300_00412579 NA coding downstream 46318 409168 ~ 412625 (-)
CI01000057_00400397_00400972 NA coding downstream 57929 400057 ~ 401014 (-)
CI01000057_00381820_00385585 NA coding downstream 73358 381333 ~ 385585 (-)
CI01000057_00339874_00343207 MRTO4 coding downstream 115430 339811 ~ 343695 (-)
CI01000057_00475661_00476027 NA coding upstream 7522 475392 ~ 476027 (-)
CI01000057_00534471_00559759 NA coding upstream 65718 533588 ~ 559759 (-)
CI01000057_00561471_00562830 NA coding upstream 93359 561229 ~ 562857 (-)
CI01000057_00628126_00628851 NA coding upstream 159845 627715 ~ 630166 (-)
CI01000057_00873279_00873578 NA coding upstream 405404 873274 ~ 873578 (-)
G244287 NA non-coding downstream 43334 413912 ~ 415609 (-)
G244305 NA non-coding downstream 51114 407220 ~ 407829 (-)
G244304 NA non-coding downstream 52970 405583 ~ 405973 (-)
G244264 NA non-coding downstream 149886 308786 ~ 309057 (-)
G244338 NA non-coding upstream 12073 479943 ~ 480154 (-)
G244339 NA non-coding upstream 12327 480197 ~ 480417 (-)
G244359 NA non-coding upstream 106666 574536 ~ 574885 (-)
G244360 NA non-coding upstream 107997 575867 ~ 576145 (-)
G244358 NA other upstream 102660 570530 ~ 571028 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other upstream 1333714 1801528 ~ 1806454 (-)
CI01000057_01904867_01921400 NA other upstream 1452186 1904533 ~ 1921905 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other upstream 3423865 3887203 ~ 3892054 (-)
CI01000057_04927533_04931127 CDK4 other upstream 4460874 4927533 ~ 4931420 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004350 abhd6a coding NC_007122.7 CM002895.2 42062067 ~ 42099645 (-)