G248916


Basic Information

Item Value
gene id G248916
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1446661 ~ 1498217 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU282496
TTTTTAAATAATTTAATACTTCTATTAAGCAAGGACTTAATGAATTGATCAAAAGTGACAGTAAAGACAAATATTTATATTCAAATAAATGCAGGTCTTTGGAACTTTCTATTCATCAAAGGATCCTGAAAAAATTTATCAACACCGCATAAAATGTTAAGTTGCACAACTGTTTTAAACATTGATAATAATAATAAATGTTACTTGAGCACCAAATCAGCATAATAGAATTTCTAAAAGATCATGTAACACTGAAGACTGGAGTAATTGATGCTGAACATTTAGTTTTTCCATCAGGAAAAAATAACATTTTAAAATATATTAAATCAGAAAATGTTTAAGAAATGTAAAATAGGAAATGTAGCCTTGTGAGCATATATGACTTTCAAAAAAAATATAAATATATATATCTTACCAACCACAAACAATTGAAACGTAATATATATAATTTCCATATCATCAAACTTGGGAGGATCTGTATTTTAAAATTCTGGCTAATACAAATAAGCTAATAATTATCTTCATATTATATAATCTGATACTTATTTTCCTGTGATAACGGATAAAAGGCTGATATTAAATTTATATTCTTTCATTGAAATAAAAAAAAGACAATAAAAATCTAAAATTAGTCATTTTAAATGTTAAGTGAATTTAGGCATCACAAAATGAATGTACAGTTCACAGTTAAAATATTAATTGTAAAGGATTAGTTCACTTTAAAATGAAAATTAGCCCAAGATTTACTCACCCTCAAGCCATCCTAGGTGTATATGACTCTCTTCTTTCTGATGAACACAATCAGAGTTATATTAATAAATATCCTGATGTGTCCAAGCTTCATAATGGCAGTGAACAGGGGCAATGATTTTGAAGCTCAAGAAAATGCATCCATCCATCATAAATGTACTCCACACAGCTCCGGGGGGTTAATAAAGGCCTTCTGAAGTGAAGCGATGCATTTGTGTAAGGAAAATATCCATATTTAAGAAGCTATAGGCTAAAGTATAGCTTCCACCAGACCGCCTTCCGTATTCAACTTAGGAAGAAAGTGTAACGCCTCTCGCAGTTCAAAACGCTTACACTACATCCTACGCCTTCCATATTCAACATACGAAAAAAGTGTAACTGACGCGATGTCAGTTATGCTTTTTCGTAAGTTGAATATGGAAGGCTGTCTAGTGGAAGCTAGATATTTTACTTCATAACTTGTTAAATATGGATATTTTTCTTACACAAACACATCGCTTCACTTCAGAAGGCCTTAATTTAATATTTACTAAAGGTTACATTTAACAATGCTATCATATTATTAGTGTTTTTAAAGATTAACTGTGAGTTAGTGTTATGTTCTCCTAAAGGAAGGACCCAAAAGTAGAAAAATGCTCAACTTCACTTTGTTACAACACAAAAAACAGTGCGAGCAAAAACTGGGCTCCGAACCAACTCTGGGCAATGGGCAAAGGGAAACAGGCTGGGATAGAAATCCAGATCAGTCCATCAGCATATAATATCCCATAGTGAGGTGAGAGTTGAGGTCAGACAAACAGAGAGAGTAAACAAGGGGCAGAGAAATCCAACCTCACAGTTTAGATCAGACTGATAGTCAGAACCGCAAGACAGTCCAAGCAGGCACGCAGTGTACTGAGAGAGAATCCAGACTCCAGAACCGGGTAAGATGGTCAAAACCAGGAAAGCTGTCCAAGACCGGAGAGTTCTAGCAGGCACACAGGCCATGGCAACACAAAAAGAAAAACGTAAGCAAAAAAAAAAAAAAAAAACTAAACAAATCAAACAGGGATCCCAAACGGGAAAAGAGGCTGGAAACACAAAACACACTGGCAGAGAAGAGAGCAGAGGGAAACAAAGGATATAGCAGAGAAATTGAGAAACAGGCGAGCAATAACGAGCAGCTGCGCTGATTGCAGAGCACAGTCACACGTTAAAGAGACAGAAACAAAACAAGAGAAAAGAAAACAAAAGGAGCGATCAAACCTGAGTCCTGACAGTTAGATGATGGTAGGGTTGTCAGGTTACCTGATTTCAGTAGTTGGTACCAATACCAGTAAAATTTCACGATTCTCGGAACCAATTTGGGTACCAGACCAACTGCTGAATTAAGAACTTCCCGTTTTGTCTTGTCCGTTGGTTATCACTCAATCATCGCAGTTCTGCAAATTCAGTCGTGCATTTAAATATGGTTGTCAATCCAGAAACTTTGCACAGTTTGCAGTGTATTTAGCAACATGAACAACTAAATTTGTATTGAGATTGTGAATGGGTAATAAATAGAAAGCAAGAGAAGAGCCCTCCCTTAATAATCACTAAGGCTGTCAAAAAAGCTATCTTGATTGTACAATAAATCTCTTACATTTACATTGTGTTTACACTTTGGTTATAATGAAAGGATTGGCGAGTGTGCGTCTCGTGTTGAATGAACAAAACAAAACCTCATGCTTTTCAGCTGTGTTAAGTGAATTCTGACTAGCACCTCTGATAGACCATTGCGTTTACGCGTTCATCAGATATGATTGTGATTGGCTGCAATGGTCAGCACACTGTATATAGAAACCTTTGATGCTCAATTGAAAGCAGCGTCTATCGGAGGAATATACCTGGTACTCGGTACTACCGGTACTGCAGAAATGCTGGTACCGTCAGCGTCAGTTTTTCAGTACTGACCGGTAGTACCTGTACGTTTGACGACCCTAGATGATGGTAAAAGTAATGAAAATATAACGTAGGGGACATGAGCATGAACAAATAAACATCCACTATCAACAATAGTTCATAACTGATATGGTGCCAATATATTGTACATATTGTTACAGGAGGGCTAGTGAGTACACATGAATAAGAACAACAAATCAGGAATTAGATCTGTCAATGTTTAACTTTTCTTCCTCAAATTAAACTGTTCAAAGAATGTTCCTTTTGAGATATGGGACAAGAAGAGACTATAATCTGCCTTTTGAAGGTCACCATATTTCAGCCTTTTCCCTCTTCAAAAAGACAAGCATATCATCATACTCTATGAAGTGAGCCAAGCTATTACAGGACATTTCGTCTTGTCGGGCTGTCAACACTCACAGACTATCATGTTGATATTTCAGTTACAGGAGGGCTAGTGGGTCCACATGAGGCTGTTTGTCTTCTCAGGTCTTCCGCCCTCACACACTTTCTCTTGTGAGTTTGATACATTGCCGTGGCCTTCAGGGCCCAGACTGGCACCACCTTATGTACCATCTGCAGGGCACGGGGAGGAAATGAGGTGCCGTTAAATGTGTGGATGCATATAAGGACAATTGAAACAGGTGGTGCACAAGCTGCCACTGTAGTTTTATATACTGAATGTGTGCATCATGCAAATTTAATGTTTATGGGTGATTCTTCATTTAGGGCCACATTTGACTGCTTGAAATCTTGAAGAATGAAACTTAATTAAAATGATATGATCAAATTCTGACCACTTATGACACCAAATAAAGCTACTCTCAGATCATCATACAGAAATCTTAAAATTAATGACATTTTGATCTTCAAACCATTGCAGTGACCTGCCTTTTTCTTATTTTCATGATAAAACATTTTTTGGGGAGAAAAAAAATGTTGTACAGACTGAAATTACTTTTTTCTTTTTTTTTTCTTTTTACTTTTTAACGCATTAGATAGGCCCAAAATAATGAAATTCTGGTCAATGTAGTATTTATACAATCATTGTAGGGGACCAAACTGAAGAATCACTCGTATTAAGTCTTGAATATGTGTCCTAAAGTCCATTGCAAATCTGCAGTACAAATTAGAAATACTTGTTGAAATACAAATTGAGAGGTGCCACAGTGCAGCTTAATACCAATTAGGAGGATCAAGCTTTGCTTAGTGAAAATATCATATTTGCAAATGAAACATACCATTGTTTAGACTAAGCAATTTTAGCACAGGTCTTAAGATCTGTGAAATCTGAGCCATTCCAACTTGAGCAGAGATCTAGTTTCAGATGTTCACACAAGCCAAGGCAAAAACAGCATATTAAGCTGATGATTCTTTTCACCACCGTCTGCCATGCTGTACCCAGCCTCAGCACTTTCCTAGCATCTGTGCTTTCCTGTCTATTTTGGTGGCTCCAATTAGAGTGACTGTGACAGTAAGGTAGTCCTGAGGTACATTATATCAGCAGGTGACAGCTCAATATATGGGCCATGGACAGCCACACAATGTTCAATACAAGCAAACTTAAATTGCTGGTATAGTTTTCTGAATGAAAGGTACCACACTCATATTAGTCAAATATGTCACTTGTTAATTAGCATCATTGAGTCCTTGGCTTTAGTTTACAATAAAACCCATGCTCCTTTCTTTTTGGATAGCATCTCTTTAAACCTCATTTGTTATTTCTTTTGATTATTGCCGCTTCAGTGAGTGACAGCTAGGTGAAATATTGAGAAAGGCAAGACTTAAATAATGCATGGCACAAGCCTAAGAGGCAGTATGTCAGCAGAGTCAATGAGCCCTTGCAGGATTTGTAGAGTCTTAAAGTTGTCATCATTGGGAACCACTACAACATATAAAAAACTAAAGACTTTGTTAAAAGTGCTTGGTTTAAATTAAAACTTATTATGGTAAAAAAAAAAATATATATATATATATATATATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282496 True 4655 lncRNA 0.36 2 1446661 1498217

Neighbor

gene id symbol gene type direction distance location
CI01000058_01418324_01423047 NA coding downstream 23134 1417497 ~ 1423527 (-)
CI01000058_01411383_01413893 NA coding downstream 32491 1410687 ~ 1414170 (-)
CI01000058_01360070_01364732 NA coding downstream 81929 1358642 ~ 1364732 (-)
CI01000058_01317202_01318789 NA coding downstream 126481 1317130 ~ 1320180 (-)
CI01000058_01292655_01293207 NA coding downstream 153454 1291960 ~ 1293207 (-)
CI01000058_01510773_01517931 NA coding upstream 12133 1510350 ~ 1519182 (-)
CI01000058_01528111_01564969 NFASC, NFASCA coding upstream 29282 1527499 ~ 1564969 (-)
CI01000058_01680894_01693752 NA coding upstream 182577 1680794 ~ 1694205 (-)
CI01000058_01694694_01723697 NA coding upstream 196462 1694679 ~ 1724208 (-)
CI01000058_01807681_01819809 NA coding upstream 309454 1807671 ~ 1819809 (-)
G248914 NA non-coding downstream 11732 1431615 ~ 1434929 (-)
G248901 NA non-coding downstream 44919 1401538 ~ 1401742 (-)
G248899 NA non-coding downstream 45796 1400653 ~ 1400865 (-)
G248895 NA non-coding downstream 65312 1381150 ~ 1381349 (-)
G248885 NA non-coding downstream 78269 1358590 ~ 1368392 (-)
G248943 NA non-coding upstream 107721 1605938 ~ 1609817 (-)
G248955 NA non-coding upstream 119234 1617451 ~ 1617654 (-)
G248958 NA non-coding upstream 122796 1621013 ~ 1622953 (-)
G249014 NA non-coding upstream 257744 1755961 ~ 1768102 (-)
G249024 NA non-coding upstream 292517 1790734 ~ 1791212 (-)
G247592 NA other downstream 791712 646443 ~ 654949 (-)
CI01000058_02859435_02860658 FAM72A other upstream 1360266 2858483 ~ 2861491 (-)
G250230 NA other upstream 2190426 3688643 ~ 3696711 (-)

Expression


Co-expression Network