CI01000059_04775037_04778148


Basic Information

Item Value
gene id CI01000059_04775037_04778148
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 4775037 ~ 4778226 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_04775037_04778148.mRNA
GTGAAAGCTGTCTTTTAAAAGAGATGAGGATTTGGCTCATGAGTTTCGGTGAAACAGAAAAATCCATTTTAAACCTGATTTTTGATGGAGGAAGTTATGATGAAATTGGCAGTGGTAGGCTTAAGAGTTTCAAAGGTTCGATGAACAAGAAGATTGTGCACTTGGTTGATATTGATATTTGCAATGCCAAGAGGGTCCTTAGATGGGAAAAGCTGACTCCTGGGCCTCATGCCATTCTGCTTGCATTGTGTCTGCATGAAAGCCAATTCACAGACCAGACCAAAGAGATTCTTGAAAAGTTAGAGTTTCTTGGAGAGAAATTTTGGAATCACGTCATTGTAGTATTTACAGAGGGAGACTGTAGTATAAATGAATATACTGGAGCTCAGAGAAGCGTATTAGAGTGGCTTCATGAAAAATGTGGACACAAAACATACATCTGTGGCTCTGAACCAGAAACTACAGAAAGGAGAGAGCTGTCAAAGAAGATACAGAGGATGATCAGAAGAAATAATTCAGTGCATCTGGTATTACCAGAAATTTCAGATGGCGATTCTAAGTCCCCTTCAGACATTTTAAGGAAGCTAGATGTAAAGGATTATTTGTTCACTCCCGAGGTCATCTTTCAGGAGGGGCAAAGTAAATACAGGTATATATCAACAAACAGGTTACAGAGCAGCCATGCAGGCTGGTTCCATTGTGAGTTTACAAAGCTTGGTTTTAACATGAAGGGTGAAGGAGAGGTGCTGTATAGCACTGTTCTTCAGGACGACGACTGTCCAGTACCTGCCAACCATTACCAAGCAGGACCCCTGTATGATATCAAATGTGTTCAGGGTGAGCTGTCCCAACTCAGTCTACCTCACTGTGAGACCTCCATTGTCTTCAGCATCAGTGCATCGTCCAGTCACCCGGTTCGCTATTCACCTCGACTCACTATCTGCAACAGATAAGAGCTGTCACTTCTCTGCTAGTATCACCCCATTGATCTGCTACCCAGTTACTCACCTTGTTTCTCACCTGGTGTTTCA

Function

NR:

description
interferon-induced protein with tetratricopeptide repeats

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_04775037_04778148.mRNA True 1031 mRNA 0.43 4 4775037 4778226

Neighbor

gene id symbol gene type direction distance location
CI01000059_04772561_04774001 NA coding upstream 543 4772561 ~ 4774494 (+)
CI01000059_04738121_04755527 HNRNPUL1 coding upstream 19000 4737897 ~ 4756037 (+)
CI01000059_04696095_04711041 RASL10B coding upstream 63405 4696095 ~ 4711632 (+)
CI01000059_04633952_04678096 AP2B1.L, AP2B1 coding upstream 96766 4633952 ~ 4678271 (+)
CI01000059_04597371_04601178 ORAI2, ORAI1.S, ORAI1 coding upstream 173690 4597327 ~ 4601347 (+)
CI01000059_04788367_04802962 SYMPK coding downstream 10141 4788367 ~ 4802962 (+)
CI01000059_04804388_04804862 NA coding downstream 26162 4804388 ~ 4805013 (+)
CI01000059_04805360_04812055 RSPH4A coding downstream 27054 4805280 ~ 4812074 (+)
CI01000059_04824311_04826989 NA coding downstream 46085 4824311 ~ 4827043 (+)
CI01000059_04856861_04864485 EHD2A coding downstream 78592 4856818 ~ 4865032 (+)
G253569 NA non-coding upstream 7348 4767335 ~ 4767689 (+)
G253568 NA non-coding upstream 11176 4763608 ~ 4763861 (+)
G253537 NA non-coding upstream 25480 4747333 ~ 4749557 (+)
G253564 NA non-coding upstream 46180 4728655 ~ 4728857 (+)
G253562 NA non-coding upstream 50651 4724034 ~ 4724386 (+)
G253523 NA non-coding downstream 87536 4865762 ~ 4867891 (+)
G253585 NA non-coding downstream 173472 4951698 ~ 4952570 (+)
G253539 NA non-coding downstream 177810 4956036 ~ 5007606 (+)
G253614 NA non-coding downstream 324665 5102891 ~ 5104208 (+)
G253615 NA non-coding downstream 328336 5106562 ~ 5106807 (+)
G252732 NA other upstream 1571946 3202739 ~ 3203091 (+)
CI01000059_02133197_02134625 NA other upstream 2639859 2133003 ~ 2135347 (+)
CI01000059_02068570_02070710 NA other upstream 2703113 2068544 ~ 2071924 (+)
G251249 NA other upstream 3113647 1627766 ~ 1661390 (+)
G251017 NA other upstream 3707680 1056252 ~ 1067357 (+)
G253654 NA other downstream 459533 5237759 ~ 5238233 (+)
G254692 NA other downstream 1481817 6260043 ~ 6261633 (+)
G255434 NA other downstream 2666716 7444942 ~ 7450195 (+)
G256046 NA other downstream 3575993 8354219 ~ 8354873 (+)
CI01000059_08640558_08653639 NA other downstream 3853725 8640451 ~ 8654233 (+)

Expression


Co-expression Network