CI01000059_06656629_06660298 (SPAG7)


Basic Information

Item Value
gene id CI01000059_06656629_06660298
gene name SPAG7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 6656387 ~ 6660298 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_06656629_06660298.mRNA
ATGGCGGACCTCCTGGGCTCGATCTTGAGCTCGATGGAAAAGCCTCCAAGCGTTCACAACCAAGAAAGCCGACGGAAAGCTAAAGAACAAGCAGCCAGGCTGAAGAAGATCGAGGAGCATGAGAGGAGAAAAAAAACAGAGTTTAGGAGAAAGATGGAGAAGGAGGTGTCAGACTTCATTCAGAACAGCACATTGCAGAAGAAGAAATATGACCCAATGGGAAAGATCGAGAGAAGCATATTGCATGATGTGGCCGAGGTGGCGGGGCTGGCGTCGTTTTCCTTTGGTGAGGATGAAGAGAGCAGATATGTCATGCTGTTTAAAAAGGAGTTTGCACCATCAGATGAAGAACTGGAGGCTTATCGCAAAGGTGAGGAGTGGGACCCGCAGAAAGCTGAGGAGAGGCGTCGGCTAAAGGAAAAGGCCGCATTGGAGATGGAAGCGGCCAGTCACAGTCAGAAGAGGCCTGCGTCGCCCAATTCAAACTACAGAGACAAATACAGCCATCTGATTGGAACATCTGCTGCTAAAGACGCCGCCCACACGCTTCAAGCCAACCAGACATATGGCTGTGTTCCTGTGGCCAATAAGAGAGACACTCGCTCCATTGAGGAAGCCATGAACGAGATCCGAGCCAAAAAAAGGCAGAAGAAAGACGAGGAAGAAGGAGCTGGCAGCGGCAGCGGTGTGTGAGAGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGATCAGTTGGGTGATGGAACAGTATTTTACTCCTATGACAATGTTTTACATGAACAGCCGGGTTTGGTAAAGATGAATTGTCATGCACATAAAGGCAGTCCAGAACTGCCACAGTATAAGCGCACTGTTCAAAAATGCTTCGAACTCTATATTACTGTCCCAAATAATGTGTTTTTATTAGAATAAA

Function

symbol description
spag7 Predicted to enable nucleic acid binding activity. Orthologous to human SPAG7 (sperm associated antigen 7).

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_06656629_06660298.mRNA True 935 mRNA 0.48 7 6656387 6660298

Neighbor

gene id symbol gene type direction distance location
CI01000059_06642665_06650346 RNF167 coding downstream 5389 6642309 ~ 6650998 (-)
CI01000059_06621058_06632392 WASF3 coding downstream 23478 6619898 ~ 6632909 (-)
CI01000059_06606518_06612481 GTF3A coding downstream 43906 6606491 ~ 6612481 (-)
CI01000059_06560307_06561286 GSX1 coding downstream 94937 6559784 ~ 6561450 (-)
CI01000059_06546191_06552012 ABHD10A coding downstream 104375 6546052 ~ 6552012 (-)
CI01000059_06668658_06675615 SLC25A11 coding upstream 6622 6666920 ~ 6675615 (-)
CI01000059_06743553_06768560 KIF1C coding upstream 82963 6743261 ~ 6768560 (-)
CI01000059_06817935_06848280 NA coding upstream 157592 6817890 ~ 6848280 (-)
CI01000059_06914640_06936857 NA coding upstream 253564 6913862 ~ 6936857 (-)
CI01000059_07002729_07060398 DLG4 coding upstream 342379 7002677 ~ 7060398 (-)
G255176 NA non-coding downstream 76840 6579090 ~ 6579547 (-)
G255172 NA non-coding downstream 81745 6574431 ~ 6574642 (-)
G255168 NA non-coding downstream 86276 6569871 ~ 6570111 (-)
G255134 NA non-coding downstream 120791 6535218 ~ 6535596 (-)
G255118 NA non-coding downstream 185514 6470660 ~ 6470873 (-)
G255203 NA non-coding upstream 25597 6685895 ~ 6686151 (-)
G255205 NA non-coding upstream 29413 6689711 ~ 6689945 (-)
G255209 NA non-coding upstream 35752 6696050 ~ 6696343 (-)
G255158 NA non-coding upstream 137472 6797770 ~ 6801605 (-)
G255238 NA non-coding upstream 150504 6810802 ~ 6811025 (-)
G255092 NA other downstream 413595 6236106 ~ 6242792 (-)
G254203 NA other downstream 1418088 5237786 ~ 5238299 (-)
G253914 NA other downstream 1902305 4753538 ~ 4754082 (-)
G253013 NA other downstream 3184478 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 4556720 2094279 ~ 2098985 (-)
G256890 NA other upstream 2321398 8981696 ~ 8982117 (-)
G257014 NA other upstream 2793918 9454216 ~ 9599008 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031648 spag7 coding NC_007116.7 CM002889.2 68059924 ~ 68074592 (-)