CI01000059_06914640_06936857


Basic Information

Item Value
gene id CI01000059_06914640_06936857
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 6913862 ~ 6936857 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_06914640_06936857.mRNA
AGGTCCTGATGAATACAAAGACCGCGACATCAGATCTGAAGTGGACAATATACTCTCGATCTAAACCTGAGTGGGAAGAGGTCAGTGGCCTAGATGAGGAGAACAACAGCGTGAGGACCTATGAAATCTGCCAGACTGACGGCTCGAACAGTCACTGGCTGCGCAGTAAGCTCATCGAGAGGCGAGGGGCGTCGCAGGTGTATGTGGAGCTGCTTTTCACCATTGTCGAATGTTCAGCGCGGAACACACATCACCGGTCCTGCAAAGAGACCTTTAACCTTTACTACTACCAGACTGACACGGATGACGCAACAGCAACCCACCCTGCGTGGATGGAGAACCCCTATACAAAGGTTGACACGGTGGCCGCCGACTTCCTGCTCCGTAAAGATGGAGACAAGAAGGTTAACGTCAAAACGCTGCGTCTGGGCCCATTGACCAAACGTGGATTCTACTTGGCGTTCCAGGCCCAGGGAGCGTGCATGGCGCTTCTATCCGTGCGCGTCTTCTTTAAGAAGTGTCCGGCTCTCACACGCTCACTATCGGTTTTCCCGGAGACAGTTCCACGCTCGCTGGTGCAGGAGGCAGTGGGCCAGTGTGTGGCCAACGCAGCGCAGCCTGGACCAAATCCCAGACCGCCCAAGATGTTCTGTGGAGAAGATGGACAGTGGGTGGACCAGCCCACCACCACCTGCACTTGCCTGCCGGGCTTTGAGGCCAGCCATGGAGAGCTGGAGTGTAGAGCGTGTCCTGCGGGTCATTTTAAGATGGGTTCTGGTCCTGGTCCGTGTTCTGCGTGTCCTGACTCCAGTCACACAGGAGATACGGGCTCTGCCTCGTGTGTGTGTCGCCCTGGTTTCCACCGCGCTCCCACCGACAGCCCAGATACACCCTGCACACGTCCGCCCTCGTCCCCTCGCAGCCCTGTTCCTCAGGTCAATGACACGTCTCTCACGCTGGAATGGAGCGAACCGTTAGACAGCGGGGGCCGATCGGACCTCACCTACAGCGTGGACTGTCGAATATGCTTGACCCCCAGGAGCCCCTGTGCACCATGCGGGGACGGTGTGAATTATCGTCCCTCCCAAACTGGGATCCAGGGCCGCCGCGTGAGCATTTGGGGACTCCGACCTCACACCACCTACAGCTTTACCGTGATGGCCCTCAACGGGGTCTCTCCTCTGAGTCTGCAGGGGCCCGCGGGGGAGATCATCAACATCACCACCAGCCCCAACGGATCCTACAGTATCAACTACGCTACTGAGCGTGGCTTTGAGGAGAACTCCTGTCATTATATGGAGAGCAATGTCAATGAGGTTGTGCTGAGCGACTTGCGCAGGGCGACGCAGTACGAGGTTCAAGTCCGCGCCCGCACCTTTGCCGGCTATGGCAGCTTCAGTCAAGCTATCGTCTTTCGAACCCTGCCCGACGAAGATGATTCCTCATCTCCGCTGCTTGTTACTGGGATCCTTATAGCCATGGGCATGCTGCTCCTCATCATCGTCATTGCTGCTGCAATCTACTGTATAAGGAAGCAAAATCATTTCAAAGATCCAGAACTGAGTGACAAAAATGGCCAGTATCTCATGGGTCAAGGAGTGAAAGTTTACATCGATCCATTCACTTACGAGGACCCTAATGAGGCCGTGAGAGAGTTTGCTAAGGAGATTGATGTCTCATTTGTCAAAATCGAAGAGGTTATTGGGGCAGGCGAATTTGGCGAAGTCTGTCGGGGACGGCTGAGGATTCCTGGTAAGAAGGAGAACTATGTTGCCATCAAGACCCTTAAGGGTGGATACACAGACAAGCAAAGGCGGGACTTCCTGTCCGAGGCCTCAATCATGGGCCAGTTCCAGCACCCCAACATAATCCACCTGGAAGGCATAATAACAGCCAGCTGCCCCGTCATGATCCTCACAGAGTTCATGGAGAATGGAGCTCTGGACTCGTTCCTGAGACTCAATGATGGCCAGTTTACTCCAATACAGTTAGTTGGGATGCTGCGTGGCATCGCATCGGGAATGAAATATCTCTCCGAAATGAGTTACGTACATCGGGACCTTGCCGCGCGGAACATTCTTGTCAACAGTAACCTGGTCTGCAAGGTGTCCGACTTCGGTCTGTCGAGATTCCTGCAAGAGAATTCGTCTGATCCTACATACACCAGCTCACTGGGTGGGAAAATTCCAATCCGTTGGACGGCACCCGAGGCCATTGCATTCCGTAAATTTACTTCCGCATCAGATGTATGGAGTTACGGAATTGTCATGTGGGAAGTGATGTCGTTTGGAGAGCGACCATACTGGGACATGAGCAACCAGGATGTGATCAATGCCATAGAGCAGGATTACCGGCTGCCGCCTCCCCCTGACTGTCCCACATACCTGCACCAGCTGATGTTGGACTGCTGGCAGAAGGAGCGGACGGCACGGCCACGCTTTTCCAACATTGTCTCAGCACTCGACAAGCTAATTCGCAACCCCGCCTCACTTAAAATCACCGCTCAAGAGGGGGCAGGACCCTCTCACCCTCTGTTGGACCAGCGTTCCCCACTGACGCCCTCATCCTGTGGGACGGTGGGCGACTGGCTCAGGGCCATCAAGATGGAGCGTTACGAGGAGAGCTTTCTACAGGCTGGTTACACGTCCATGCAGCTACTCGCCCACATCAACACAGAGGATCTTCTGCGTTTGGGAATAACTCTGGCTGGTCATCAGAAGAAGATTCTGTCCAGCATTGAGGCTCTTGGGATTCAAAACAAAACTCCAGGGAATGTGCTCTACTGAGTGAACCGTACACACTCACACACATGCAAACGCTTGTTGAGTTTGCCGGAGAACCTTCATGTAACCTATCCACTCACAATCAGGAACATTTCTACTTCCTTTTTACCGGGTCACTTAAGGATCAAGATTGCTTACTTGCTTCCAAGACTACCTAAAGGGGACCAGTCCAGAAACCTGTCGGAAACTTCACAGTAATACTACTAATATTACAAAGCTTCATTTGTGATATCAAACGGGTCTCATAGGGATGTTACCTCACCCTTTTCCACATTTCGGGGAGCCACATGATGTAATCCAGAAGGAAAGACTTGCTCTGACATCATAATGCAAAGACAGTGAAGTATTTCCATTTTGCAGAGTATTTTTCTAAAGGAGACTTTCGTACTGAAGAGGATCGCAGCATAAGACCTTTATAACGCAAGAATGTGGTATCAGTATCAGAGTAAAGTATCAGATTATTAATGACGACTTCTTCATCCTTCATTTTAAGGATGTGTTGTGCACAAAGGGTCAGATACACACTACGTGGCTAAAGTGCTAAGAAAATGGTATTGTTTTTTAAATGATGCACTCTGTGTGTGTGTATGTGAGCAGCAATAAGAAAAATTAGCACAAAAGTCTTAGCACTTTTTTCAGAGGAGAAAGACATGAATGAAGCAGAGGTTCCATTGGTGAACTAAATATGCGAAACATACGTGCTTATACAAACACACACACACACACACACATATGTAGAGATCTGCAACACTTGACTGGCACTAAAAAGAGACCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_06914640_06936857.mRNA True 3564 mRNA 0.51 16 6913862 6936857

Neighbor

gene id symbol gene type direction distance location
CI01000059_06817935_06848280 NA coding downstream 65582 6817890 ~ 6848280 (-)
CI01000059_06743553_06768560 KIF1C coding downstream 145302 6743261 ~ 6768560 (-)
CI01000059_06668658_06675615 SLC25A11 coding downstream 238247 6666920 ~ 6675615 (-)
CI01000059_06656629_06660298 SPAG7 coding downstream 253564 6656387 ~ 6660298 (-)
CI01000059_06642665_06650346 RNF167 coding downstream 262864 6642309 ~ 6650998 (-)
CI01000059_07002729_07060398 DLG4 coding upstream 65820 7002677 ~ 7060398 (-)
CI01000059_07144283_07150061 NA coding upstream 206989 7143846 ~ 7152701 (-)
CI01000059_07156085_07160233 NA coding upstream 218859 7155716 ~ 7160233 (-)
CI01000059_07212957_07217869 SLC25A45 coding upstream 276100 7212957 ~ 7217869 (-)
CI01000059_07222636_07225677 NA coding upstream 285596 7222453 ~ 7225677 (-)
G255719 NA non-coding downstream 10395 6901490 ~ 6903467 (-)
G255238 NA non-coding downstream 102837 6810802 ~ 6811025 (-)
G255158 NA non-coding downstream 112257 6797770 ~ 6801605 (-)
G255209 NA non-coding downstream 217519 6696050 ~ 6696343 (-)
G255205 NA non-coding downstream 223917 6689711 ~ 6689945 (-)
G255735 NA non-coding upstream 230649 7167506 ~ 7168853 (-)
G255740 NA non-coding upstream 294931 7231788 ~ 7231999 (-)
G255742 NA non-coding upstream 297258 7234115 ~ 7234338 (-)
G255697 NA non-coding upstream 337565 7274422 ~ 7327314 (-)
G255681 NA non-coding upstream 384662 7321519 ~ 7325568 (-)
G255092 NA other downstream 671070 6236106 ~ 6242792 (-)
G254203 NA other downstream 1675563 5237786 ~ 5238299 (-)
G253914 NA other downstream 2159780 4753538 ~ 4754082 (-)
G253013 NA other downstream 3441953 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 4814195 2094279 ~ 2098985 (-)
G256890 NA other upstream 2044839 8981696 ~ 8982117 (-)
G257014 NA other upstream 2517359 9454216 ~ 9599008 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location