CI01000059_09346204_09347082


Basic Information

Item Value
gene id CI01000059_09346204_09347082
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 9346188 ~ 9348023 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_09346204_09347082.mRNA
ACACGTTTAGTTCCCTGTTCTCCTGCTTTACCGCTCTCGCTGCATTACTCAACAAGTATCACATAATGTTACAGTCTAGCATTACATTCAACACAACCACCATAAACTGAAGAGACGCATGTTCCTCGTCTTATTGTGAATGATTCATCTGTGCAAGTTTTTATTCTACTTTAATCAAAATGTTATAACATTTCTTTTTGGTTATTTCTTTTTCCTCTGATGTTGTGCAGGCTACTGTATAATCTTTATAATCAGTTCCTGATGGATAAAATCAAGTCCTGCCCATTTTTCTAATTGAAAATCATTGCATAAAAAATAAATTTGACTTTACAAGCATGCACAAATGTTTTAATCACGCAGAACAGAAATGAACCATTACAAATGTCAAAATAGATAATTTTGTTAACTGTGTTAAATATATGTGATGACATTATTTGTTAGGCTAATATCATTTATAATATTTACAATAAAAAAATAATATGAGAATTGCAATTGTATAGAAAGTTGTGCACATGTGTAGGGTTATGCTTATAAATGTACTTGATATTGTACATTTCAGTTACACTTTATTTTAAGGTGTCCTTAAAGTGTAATTATACATTTAAGTACTGAGTAATATTAATTAATTACATGTACTGTACATGGGTTAGGGTTTTTTTAGGGTTAGTTTCATGTAACGGGGCTATATTAGTTTACCGTACTGCCCTTTGGACTCCATGGGGCACCTACCACCTGGACCAAGTTCTCCAGAGCTGTGAAGACTGGTCTGTGGCTTACCTAGATGATGTGGTAATCTACAGCAACACCTGGGCAGACACACTTGAACCACCTGGCACAAACCCTGGAGAAGATCCAAGCAGCTGGCCTTACCCTGAACCAGCTACTTGGGGTGGCATCTGGGCAACAGTGAACTGCAACCCCACGTTGGCAAGGTAGAGGCAATGCAGCGCAGTCCCCAAACCAAGACAAAGAAGGAGGTAAGAATCTTTCTGGGCCTAGTGGGCTGGTACTGCAGATTCATTCCTAAATTTGCCACAATTTCAACACCTCTGACGAACTTGCTGATTAAATCTGCAAAGAACCCAGTGGTATGGACCGAAGACAGTGAGACAGCTTTTAACACTCTGAAGATTTGCTCCATCAAGGTCCTACAATGTCCAGACCTTGAGATGGGCGATCGTGCACTGACATGGATCCACACGATGAAAGATCACAATGCCCCAGTGACAAGATGGCACCTGGCCCTTCATCAATACAGTTTCAAGATACTACATCTACCCGGGAGGCAGAATGTAGGGACCGAGTACCTGTCCAGGTACCAGAACAGGTCGGTAACAGTTAAGTCGGTCGACTCGAGTAAAACAATGGTGGCTGTTGATGACATTGTCTGACCACCATCACAATAAA

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_09346204_09347082.mRNA True 1407 mRNA 0.40 3 9346188 9348023

Neighbor

gene id symbol gene type direction distance location
CI01000059_08541617_08550032 LHX3 coding downstream 796156 8541161 ~ 8550032 (-)
CI01000059_08483765_08492276 NA coding downstream 853370 8483445 ~ 8492818 (-)
CI01000059_08434015_08446002 NACC2 coding downstream 900186 8433695 ~ 8446002 (-)
CI01000059_08382830_08423907 NA coding downstream 921464 8382372 ~ 8424724 (-)
CI01000059_08360308_08360726 NA coding downstream 985381 8359765 ~ 8360807 (-)
CI01000059_09706218_09708197 TRIM32 coding upstream 357247 9705270 ~ 9709619 (-)
CI01000059_09783667_09789126 NA coding upstream 435606 9783629 ~ 9789298 (-)
CI01000059_09797419_09887264 PAPPAA, PAPPA coding upstream 449357 9797380 ~ 9887264 (-)
CI01000059_09908635_09925766 ZNF618 coding upstream 559864 9907887 ~ 9925766 (-)
CI01000059_09990989_09995182 RGS3A, RGS3 coding upstream 641480 9989503 ~ 9995251 (-)
G256951 NA non-coding downstream 66170 9126780 ~ 9280018 (-)
G256947 NA non-coding downstream 230009 9115978 ~ 9116179 (-)
G256929 NA non-coding downstream 294554 9051417 ~ 9051634 (-)
G256883 NA non-coding downstream 333441 8963296 ~ 9012747 (-)
G256820 NA non-coding downstream 339824 8956469 ~ 9006364 (-)
G257020 NA non-coding upstream 19784 9367807 ~ 9369543 (-)
G257031 NA non-coding upstream 36650 9384673 ~ 9415201 (-)
G257156 NA non-coding upstream 243563 9591586 ~ 9593365 (-)
G257158 NA non-coding upstream 246469 9594492 ~ 9613237 (-)
G257159 NA non-coding upstream 246984 9595007 ~ 9613501 (-)
G256890 NA other downstream 364071 8981696 ~ 8982117 (-)
G255092 NA other downstream 3103396 6236106 ~ 6242792 (-)
G254203 NA other downstream 4107889 5237786 ~ 5238299 (-)
G253914 NA other downstream 4592106 4753538 ~ 4754082 (-)
G253013 NA other downstream 5874279 3471475 ~ 3471909 (-)
G257014 NA other upstream 106193 9454216 ~ 9599008 (-)

Expression


Co-expression Network