XLOC_010280



Basic Information


Item Value
gene id XLOC_010280
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 50299680 ~ 50347897 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00022041
GCGGGATACGGATGCGTCATTTTACAagctgtttgttttattaattaatttattttatcgtttTACTGTTGAAAAAAGGCGGGATATATAAATATTGTGAATAATGGATAAATAAGATGCTGGTCAAGACAGTTCATCATCTAGAAAAGACTGCATTCTGAAGAAAGTGGGTTATTCGGATTCAGACATAAGGTGGCATCTCgacgcagacagacagatagatgtagCCAGTGAAGATGTAAAATAGGAGCTTGGGAAAATAAAAGCAAGCGCAGGAATAAAGCGAGATACGGGGAGGATCTGCGAGGAGGAGTGAGAAAGCGTGTGGAACAGATGGAGTTTTTGAGGCAGCGGCGATGTGggccagaagaataaatatttatGTCCTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00022041 True 389 lncRNA 0.40 3 50299680 50347897

Neighbor


gene id symbol gene type direction distance location
XLOC_010279 hamp coding upstream 7097 50289916 ~ 50292583 (+)
XLOC_010278 NA coding upstream 39363 50235380 ~ 50260317 (+)
XLOC_010277 si:ch211-231m23.4 coding upstream 135399 50163364 ~ 50164281 (+)
XLOC_010276 nr1d2a coding upstream 188623 50089417 ~ 50111057 (+)
XLOC_010275 ube2e2 coding upstream 221211 50006145 ~ 50078469 (+)
XLOC_010281 IGLON5 coding downstream 86771 50434668 ~ 50824469 (+)
XLOC_010282 NA coding downstream 114347 50462244 ~ 50463641 (+)
XLOC_010283 NA coding downstream 121987 50469884 ~ 50472417 (+)
XLOC_010284 LO018415.1 coding downstream 159279 50507176 ~ 50507295 (+)
XLOC_010285 NA coding downstream 239339 50587236 ~ 50588325 (+)
XLOC_010273 NA non-coding upstream 681059 49601609 ~ 49618621 (+)
XLOC_010272 CABZ01059142.1 non-coding upstream 751794 49547771 ~ 49547886 (+)
XLOC_010270 NA non-coding upstream 1135588 49161419 ~ 49164092 (+)
XLOC_010264 NA non-coding upstream 1622646 48668314 ~ 48677034 (+)
XLOC_010286 NA non-coding downstream 260865 50608762 ~ 50611164 (+)

Expression



Co-expression Network