XLOC_010285


Basic Information

Item Value
gene id XLOC_010285
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 50587236 ~ 50588325 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022044
AAATTTTCTTAgatgtctgtttttgttttttgttttatatggtGGAAATGCTTGTTATACCAATTTCTGGGGGGCATTtactttttcaaaaaacATTTTCGTTATGCAATCCTCAAAAAGCTTGAGTTAATATCCTAAAAGCATAACTGTACgcttttatttcataaaaaaaaaaaaaaaaagtgctttaacaTTTCCTGGATGcctttgttatttattaatatggtTAAAATGCTTGGCCTATAGCAATTTATGGGGGGCATTTACTTTTTCACAAAATGTTGTTGTTCGAGTTCTtacatattatgtgctgtcagtGCTTAATATGGTCAGGAATTACTTAAATATGATAAAATGCCAGTCTATAACTCATTAATGGGGGGCATTTACTTTTTTCACAAAACATTTTCATCATGCACTCCTCAAAATGCTTGATCTTAAAGGCTCAACTGTAAacttttatttcataaaaaaagcaGATAGAACTTTTCCTAGATGTctatgaaattattttaatatggtTGAAATGCTTGTATTATACCAATTTATGGGGGGCATTTACTTTTTCACACAACATTTTTGTTCGAGTTCTTACATATTAAGTGCTGTCAGTTTTTAATATAGTCAGGAATTACTCAAATAGGGTGAAATGCCAGTCTGTTACCCCTTTATGGGGGGCATTTACGTTTTTTACAAAGCATTTTCGCAATCCTCAAAATGCTTAAATTAATATCCTCAAAGCATAACTGTAgactttatttaatgtaaaaaagtgGATTGAACGTTGGATACCTATAGTTTTCTTACTATTATGGGTGGAATGctataattttaaatacattcatgTTTGTTCACATTTTGAGTGAACAAACGCTTTAAATGAGTCTGAAGTCTGTAGTTATACGTTTTtgagatttttaatgatttttcacTTCTTAAAATATGTCCAATTTTATATTTGCAAGCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022044 True 967 lncRNA 0.30 2 50587236 50588325

Neighbor

gene id symbol gene type direction distance location
XLOC_010284 LO018415.1 coding upstream 79941 50507176 ~ 50507295 (+)
XLOC_010283 NA coding upstream 114819 50469884 ~ 50472417 (+)
XLOC_010282 NA coding upstream 123595 50462244 ~ 50463641 (+)
XLOC_010280 NA coding upstream 239339 50299680 ~ 50347897 (+)
XLOC_010279 hamp coding upstream 294653 50289916 ~ 50292583 (+)
XLOC_010286 NA coding downstream 20437 50608762 ~ 50611164 (+)
XLOC_010287 NA coding downstream 45673 50633998 ~ 50640920 (+)
XLOC_010288 si:dkeyp-97a10.1 coding downstream 365222 50953547 ~ 50968750 (+)
XLOC_010289 si:dkeyp-97a10.2 coding downstream 380923 50969248 ~ 50980728 (+)
XLOC_010290 NA coding downstream 488747 51077072 ~ 51084652 (+)
XLOC_010278 NA non-coding upstream 326919 50235380 ~ 50260317 (+)
XLOC_010293 FQ323156.1 non-coding downstream 604330 51192655 ~ 51214029 (+)
XLOC_010294 NA non-coding downstream 637122 51225447 ~ 51229303 (+)

Expression


Co-expression Network