XLOC_010294



Basic Information


Item Value
gene id XLOC_010294
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 51225447 ~ 51229303 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00022048
ATTCAACAGAAAATGGCACCGATAATCGAAAACAGCAGTGAGTGTGAAAATGACTGGCGTTCCTCTGGGAAACTGGTGCCAACAACTGCAAGGTCACGCTTCGACTGCCAGGTGATAAATATATACAGATCAAATGCATGTCTCTAATCACTGAGGATAAACACATATGCCAGTCATGCAAATGTAAACTGCCATCTGATAAGTGCTTTTTTCCAGCAAGGATGTGTTACATTATTTAAAGGTGACAGTAAAGATGTTATAAAAGATTGCATTTCAGATAAATGCCGTTCACAACACTGATGATACTTGGTTTCTGAAGGACTGTGTGACTGTTCAATAGAAATAAGTTACTTTTACTATGTAAATATGATATGTAAATTTTACTGCAGgtgttcag

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00022048 True 397 lncRNA 0.37 2 51225447 51229303

Neighbor


gene id symbol gene type direction distance location
XLOC_010293 FQ323156.1 coding upstream 11418 51192655 ~ 51214029 (+)
XLOC_010292 hmgn2 coding upstream 41321 51180938 ~ 51184126 (+)
XLOC_010291 dhdds coding upstream 47179 51154918 ~ 51178268 (+)
XLOC_010290 NA coding upstream 140795 51077072 ~ 51084652 (+)
XLOC_010289 si:dkeyp-97a10.2 coding upstream 244719 50969248 ~ 50980728 (+)
XLOC_010295 C16H1orf232 coding downstream 96934 51326237 ~ 51331520 (+)
XLOC_010296 SLC9A1 coding downstream 233317 51462620 ~ 51528483 (+)
XLOC_010297 NA coding downstream 329829 51559132 ~ 51707952 (+)
XLOC_010298 dre-mir-455-2 coding downstream 547233 51776536 ~ 51776640 (+)
XLOC_010299 NA coding downstream 831638 52060941 ~ 52062972 (+)
XLOC_010287 NA non-coding upstream 584527 50633998 ~ 50640920 (+)
XLOC_010286 NA non-coding upstream 614283 50608762 ~ 50611164 (+)
XLOC_010285 NA non-coding upstream 637122 50587236 ~ 50588325 (+)
XLOC_010301 NA non-coding downstream 1001191 52230494 ~ 52232341 (+)
XLOC_010303 LO018250.1 non-coding downstream 1156291 52385594 ~ 52410592 (+)

Expression



Co-expression Network