CI01000063_01784971_01788682


Basic Information

Item Value
gene id CI01000063_01784971_01788682
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1784971 ~ 1788898 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_01784971_01788682.mRNA
GAGAACTATTATTTACCTCAGTCCTCCTGGGCCCAATTACGAGGCTCTGAGTCGTCAGAGGTGTTCACTTCTACCCTACTGTGCTATTGTACTGACTTTACAGTTGAAGAACAGTGGAAGAGCATCAAAACAGAACAGTAGTGAGCATCAAAAGGGCAAAGAGAGTGAAGATCCAGTGAGTGATTTTGAGGAAGAACAACTACGTGGAAAAGAAAGTAAAGATCCAGAGAGTGATTCTGATGAAGAGCAACTACAGGGCAAAAAGAGTGTAGGGCCAGAGTGTGTTTTTTCTGAGGTAGAACATCAAGTCAGCAAAGAGAGTGAAGGGCCAGAGAGGAGCCATGAGGTTAAAAGCAATAATAGTGAGAGACTGGAAGTCATTGAGTCTGGAAGAGACAATGCCACACCACACCTGGACCATCAACAAAAACCTGACACAATTTCACAAAGTTACAGAGCAGAGGCAGTGCGAAGAGGACCATTTCAAGTCAGAGAAAGTCATGTTTTTCCAAAGAATAAAGATGGACGAGCCTTTTCACATAGTCTGTTTTATAGAAAAATGCCTAATGGTGAAAGAGTCAAAAGATCATGGTTGTCATATTCAGAGGTGAATGATGCAGTCTTTTGCTACAGCTGCAAACTTTTCTCTACCCAAGTAATTAAGCTCATTAAAGGAGGATTAAATGACTGGAAGAACATCCACACCATCCTGCGCAGCCATGAGAACAGTTCTGAGCATATAAGCACCATGCAGAAGTGGAGGGAATTAGAGTTGCGGTCTACAACAGGTCAAACCAGAGACCAGAGACAGATGACCCCTTTGGAGGAAGAAAGACAGAGCCACCTGGAACAGATGTCTATCATTCTACGCATTGTGGAACTACAGCCAGAGACAGAAATAAAAGAATATTTTCTGGGATTCTTGGTTGTGGAAGAGACAACTGGCAAAAATCTGTCTATGAGATGGTCTATTTTGAAAAAATATGTGGACCTCACTCTTAAATCATGGAGTGACACAAGGTGGGAGAGCAGATTACAAAGTGTTCAGGCTGTCAGGTTCCAGGTTGCCCAAATCAGGGAAGCACTTGTAGAAGTACGGCAGAGTTTGTCTGATCTCGTTTCTAAAGTAGAGGCCCAAGCTCTTGCTGAAGAATTGGGGTCTTATCGCTTTTTGATTTGTTCTGTTGTGTGGTGTGACATTCTGACACTTGTCAACCAGGTCAATAAGCTTTTCCAGTCATCCTCTATGCAACTGGATGTTGCTTCAAACCTGATCACATCCACCAAAGCAACACTCTCACAGTATAGAGCCTCTGGCTTTGCTGCAGCACAAGCAACTGCAAAGGATCTCTGTGAGGAAATGAACATAGAGGCGGTTCTCAAATAGAAGAGACTCCGGAACACCAGGAAGTAGTTCTCTTATGAGGCTGCTGATGAGCCTCTGGCCGACGCACTGCAAAACCTGAAAGTGGCATTTTTTAACACAGTTGTGGATGTAGCACTTCATTCTCTTGAGGAGAGATTTCACACCGTGGAAAATGTTAGGGACACTTTCGGTATCCTTTTGAATTTTAATGATGTTGCAACCATGTCAAGAGGTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_01784971_01788682.mRNA True 1603 mRNA 0.43 5 1784971 1788898

Neighbor

gene id symbol gene type direction distance location
CI01000063_01739754_01764028 RHBDF1B, RHBDF1, RHBDF1A coding upstream 20199 1739244 ~ 1764772 (+)
CI01000063_01692878_01697954 NA coding upstream 86893 1692394 ~ 1698078 (+)
CI01000063_01675750_01678399 HBBE3 coding upstream 106513 1675501 ~ 1678458 (+)
CI01000063_01672649_01673337 HBBE2 coding upstream 111586 1672574 ~ 1673385 (+)
CI01000063_01662111_01665744 AQP8A.2, AQP8, AQP8A.1 coding upstream 119227 1662111 ~ 1665744 (+)
CI01000063_01824468_01849446 NA coding downstream 33956 1822854 ~ 1849454 (+)
CI01000063_01950136_01991996 SHISA9A coding downstream 159276 1948174 ~ 1992128 (+)
CI01000063_02207083_02208978 MAFF, MAFFL coding downstream 418185 2207083 ~ 2209144 (+)
CI01000063_02259693_02263566 NA coding downstream 470581 2259479 ~ 2263765 (+)
CI01000063_02287935_02290399 NA coding downstream 497443 2286341 ~ 2291640 (+)
G262314 NA non-coding upstream 46650 1737798 ~ 1738321 (+)
G262104 NA non-coding upstream 98607 1682219 ~ 1686364 (+)
G262101 NA non-coding upstream 128922 1655202 ~ 1656049 (+)
CI01000063_01533946_01534527 MSRB1B non-coding upstream 249596 1533853 ~ 1535375 (+)
G262266 NA non-coding upstream 275343 1509279 ~ 1509628 (+)
G262333 NA non-coding downstream 17066 1805964 ~ 1806185 (+)
G262122 NA non-coding downstream 22610 1811508 ~ 1813486 (+)
G262098 NA non-coding downstream 61458 1850356 ~ 1854092 (+)
G262511 NA non-coding downstream 211964 2000862 ~ 2001064 (+)
G262517 NA non-coding downstream 219099 2007997 ~ 2008296 (+)
G262194 NA other upstream 639964 1139352 ~ 1145007 (+)
G262060 NA other upstream 1074417 710110 ~ 710554 (+)
G261984 NA other upstream 1117589 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 1226637 533801 ~ 558334 (+)
G261700 NA other upstream 1510521 252412 ~ 274450 (+)
G262423 NA other downstream 452510 2241408 ~ 2242965 (+)
G262436 NA other downstream 924717 2713615 ~ 2714517 (+)
G265391 NA other downstream 4124885 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 4546380 6335618 ~ 6338283 (+)

Expression


Co-expression Network