CI01000063_02454392_02493278 (EP300A)


Basic Information

Item Value
gene id CI01000063_02454392_02493278
gene name EP300A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2454342 ~ 2493654 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_02454392_02493278.mRNA
GTATAAATGGTAAATTATGACAAACACAGGCGAAGATTCAAAACATCAATATGAACATTGTTGAGTGTAAAAGAAACAATTCTTACCTGCTTTACCCCTTAGAAAATCCAATGTGCAGTGGTTTGCTCATCGTGAACAGCGCATTAGCGCCATCATCCGGACTGGAGAACCAGCTATTATATTCCAATTTTGGCTCGCTTTTTGACCTGGAGCATGACCTTCCAGATGAGCTGATTAGTTCCTCAGAGCTGAGTCTAGAAAATGGAGGGGACCTTGGTCAGTTGCACGCCAATTTGGGTAGTGGGGGCGGGGCCATTGGAGGAGTTGTGTCCAGTGGCCAGGATGCAGCGGCCAAGCACAAGCAGCTCTCAGAACTCCTCCGGCACGGACCTGCACCTGCAGCACCGCAGCAGGGTGCGATGTGCAGCCCAGCAGGAGCCTCAATGGGGCTTTTCGGGAATATGAAGTCTTCTCCGGGCACCCAAGGCATGGGCCCGCAAGGGCAACAACATCTTTCCCCACAACAGGTCGCCCTTATGCAACATCAGCAGATGGCAGGGATGGTGGGCAACATGAACAGGAATATGCTCGGACCTCAGAAAGGCAATGGACAGCAGCAGCCAGGGGGGCCCATGCCCCAGCAGCAAAACATGCTGGGAGCACAGATGATGAATGGATCGCCCAGAATAGGACATCACAACCCGGGCATGGGAAGCAACAGTAACCTGTTAGCAGAGGCTCTTCAGCAGCAGCAGACAGTAGGAGTCCAGGGTGGACTGAGGGCACAGCAACCTGGAGCAATGAACAAGATGGGGATGAATGCAGGTTCAGGCCCCTATGGAGGCCCATATGGTCAGCCTGCCAGTCAGGGTCTGGGTGTTGCAGGGCTGGCCCCTCAGCTCCAGAACAAAGTAGGTCTGTCCAACAGTCCAGCCCAGTTTAACCTCGACAAGAAACCCCAGCCTATGCAGGGCATACCTGGCATGCAGGCTTCTCAGCTTTCCCCAGCGGGCGCTGCCGGAGGAGCAGGAACGGGCGGCATGGTGCCCAATGCCCAAGGAACTCTCGGCCCCGGATCAGCTGCATCAGCCGTGTCTGCAGCAGCGGTGGGAGGTGTTCCTCCAGCAGCCGATCCAGAAAAGCGCAAACTCATACAGCAGCAGCTGGTGCTTTTGCTTCATGCACACAAGTGCCAGCGGAGGGAGCAGGCCAACGGGGAAGTACGGCAGTGTAACCTGCCCCACTGTCGCACCATGAAGAACGTCCTCAACCACATGACGCACTGCCAGGCTGGCAAATCTTGCCAAGTGGCACACTGTGCCTCTTCCAGACAGATAATCTCTCACTGGAAGAACTGCACGCGGCATGACTGCCCTGTATGTCTACCTTTGAAAAATGCAGGAGACAAGAGGAATCAACAGACTTTGCTAGGCTCTGGAGGTGTGGGGTTAAATTCTTCTTTGGGTAATGTAACTGGTGGTCCGCCCAGTGCCCCCAATCTCAATACCCAAGGGCAGATAGACCCCAGCTCCATCGAGAGGGCTTACGCGGCCCTGGGCCTCACATACCAGGGAAACCAGGCTACCCCTCAGCCTGTCCAACAAACACAACGGGCAATGAACACCATGGGAGCGAATCCCATGGGAGTAAATGGGGCTGTGGGTGGTCAGTCTCAGAATCAGCAGTCTAACCTTCTCCAGGATACAATGTTGCATCTGAACATGAACTCACAGAGTTTGATGAATGACAGTGCTGTGGGGTCTATGCCTGTGGCCAACCCTGCTGCCAGTGCTGGCATGAGGAAGAGTTGGCATGAGGACATCACCCAGGATCTACGCAACCACCTGGTGCACAAACTAGTCCAAGCCATTTTTCCCACTCCAGACCCAGCTGCACTGAAAGACCGGCGGATGGAGAATCTAGTGGCCTATGCGCGTAAAGTCGAAGGGGATATGTATGAGTCCGCTAATAGCAGGGCGGAGTATTATCACCTGCTGGCGGAGAAGATATATAAAATCCAGAAGGAACTGGAAGAGAAGCGAAGGACACGGTTACAGAAACAGGGCATGCCCCCTACTGGCCTGCCGCAAGGGCCCACAGGGATTGGTCAGCCAGGGCCACCCACAGGATTGCCTACTAATGGTCCTCTTTCCGATCCTTCGATGGTGCGGCCTACTGGTCCAAACCAGATGAACAGGATGCCGAATGCTGCTGGCATGAATCCGTTTGGGAACCATATGGGAATGCAGTCCATGAGATCTACACCTCCTCTTCCACTCAACACAGCTCTTAACCAGGGAAGCATGGGCACTGGGAGGATGCCACAACCGAATGTTGCACAGATGCAAAATCAGTACATGCAACCTGGACAGTTTCAAGGTTCAAGTCCAAGTCTTGGTGCTGGATCTGTTGACATGGCTCACCCAGGAAATGATGGCGCTATTACTCAAGGGCAAATGCCTACTTTATCATCTTTACCAGTTGGCAGTCCTTTAGCCCAGCCTGGGTCTGCTGGAGGGGCAGGCAGCGGGTCCTCGGTGGGCTCTCTGGGTCCCAACAGCATAAGTGGGGTTCCTCCAGCGTCCACCCCAACACAGTCTATCAACCTCCCCCACTGTCCGCCCGTCCACCAGAATTCTCCTTCTCCAGCACATAGCCGCACACCCACACCCACACCAGGCTCCCAGACACCCCAGCCCCATACACCCAGTCTACCCCAGTTAGCCACGACCGGCAGTCAGCAGCAGTTACCTCCGTCCACCACTTCTGACAATGTCATGCAACCTCAGCAGCAGTCATTAGGAGGAGGAACTCCTCCCGGTGTTTCTCATAGTGGCCTCTCCACGCCAAATGGCAGCCAGCATCCCCGCACTCCGTTGTCTCATAAAGGTTCTCTGCCAGTGGACGGCCAGGCTGCTACCCCTGCCTCTGTCAGCAGTGCAGATGGATCATTTCAGCAGGGTCCTTCAGACTCCACAGCCTCCTTTGAGCCCAAGGTGGAGGTCAAGCAGAAAGAGGAGGAGGATGAGGATGAAGAAGCCATGATGGGAGGAAGAACTGGAAAGCAGGAAGACATTAAAACTGAGGAGAAGCCTGAGATAAAGAAAGAGGAGCCGTTAACTGATGGTGTCCCAATGGAGACATCTTCCACTGCAGCTGGGGAGGACAAAAAGCCAGAGATAAAGACTGAGCCTAAAGAAGAAGAAGAGGGTTCAGGGTCCACAGTTACCCACAGTTCACCTTCTGGAGTCCCTAACAAAAAGAAAATTTTTAAACCAGAGGAGCTGAGACAGGCCCTGATGCCCACACTGGAGTCTCTTTACCGCCAGGACCCCGAGTCTCTGCCCTTCCGCCAGCCTGTGGACCCTTCACTGCTGGGAATACCAGACTATTTTGACATTGTGAAGAATCCTATGGACTTGTCTACTATAAAACGGAAGCTCGACACGGGCCAGTACCAGGAGCCGTGGCAGTACGTGGATGACATCTGGCTCATGTTTAACAACGCCTGGCTGTACAATCGCAAGACGTCACGAGTCTACAAGTACTGCTCCAAGCTGGCGGAGGTGTTTGAGCAGGAGATCGACCCAGTCATGCAGAGCCTTGGCTACTGTTGTGGGAGAAAGTTTGAGTTTTCTCCCCAAACTCTGTGCTGCTATGGGAAGCAGCTGTGCACTATACCACGAGATGCTGCTTACTTTTGTTATCAGAACAGGTACCACTTCTGTGAGAAGTGTTTCAATGAGATCCAGGGTGAGACTGTGTCCTTGGGAGATGACCCATCCCAAACTCAAACATCGATCAACAAGGATCAGTTTGAAAAGAAGAAAAATGACACACTCGACCCTGAGCTATTTGTGGAATGTATGGATTGTGGTCGGAAGATGCATCAGATCTGTGTTTTGCACAATGACACTATATGGCCTTCAGGCTTTGTGTGTGATGGTTGTCTGAAGAAGTCTAACAAGACCCGTAAAGAGAATAAATATGCTGCTAAAAGGCTTCCACAGACCAAACTAGGCAACTACTTGGAAACACGGGTTAATGACTTTCTGAAGCGACATAATCACCCAGAGTCTGGTGAAGTCACTATTCGTGTTGTTCATGTCTCAGACAAAGTGGTAGAAGTCAAACCAGGCATGAAGTCTAGGTTTGTGGATAGTGGGGAGATGGCAGAATCTTTCCCATACAGAACGAAAGCTTTATTTGCATTTGAGGATGTTGATGGTGTTGATGTCTGCTTTTTTGGGATGCACGTGCAAGAGTATGGCTCAGATTGTCCACCCCCTAATCAAAGACGAGTTTACATATCCTACCTGGACAGTGTCCACTTCTTTCAGCCACGCTGTCTGAGAACAGGCGTGTACCATGAGATTCTTATAGGATATCTGGAGTATGCCAAAAAACAAGGGTTTACCACAGGGCACATCTGGGCTTGCCCTCCTAGTGAAGGAGATGATTACATCTTCCACTGTCACCCTGCAGACCAGAAGATACCCAAGCCCAAGCGGCTTCAGGAGTGGTATAAAAAGATGCTGGATAAAGCCGTAGCGGAGCGCATCGTGCATGACTATAAGGACATATTCAAACAAGCAACAGAGGATCGTCTCACCAGCGCCAAAGAACTGCCCTATTTTGAGGGTGATTTCTGGCCCAATGTGCTTGAAGAGAGTATCAAAGAACTGGAGCAAGAAGAGGAGGAAAGGAAGAGGGAGGAGAACAGCACGTCCAATGAGAGTGTTGATACAACAAAAGGTGACAGCAAAAATGCCAAGAAAAAGAACAACAAGAAGACGAGCAAGAACAAAAGCAGTTTAAGCCGAGCCAACAAAAAGAAGCCGGGGATGCCAAATGTGTCCAATGACCTTTCACAGAAACTCTATGCCACAATGGAAAAGCACAAAGAGGTGTTCTTTGTTATTCGGCTGATTGCAGCACCCAACTCCAATGCACTTCTGCCCATTGTTGACCTGGATCCTTTGATGGCGTGTGATTTGATGGATGGTCGCGATGCCTTCCTAACACTTGCACGGGATAAACACCTGGAGTTTTCTTCATTGCGGCGCTCCAAATGGAGCACTATGTGCATGCTGGTTGAACTGCACAACCAGAGCCAGGACCGCTTTGTCTATACCTGCAATGAGTGCAAACACCATGTTGAAACTCGCTTCCATTGCACTGTGTGTGAGGACTATGATCTCTGCATCACTTGCTATAATACAAAAGGTCACGAGCACAAGATGGAGAAACTGGGCTTGGGGTTGGACGACGAAAGCAACAGTCAGGCTGCTTCCTCAACGCAGAATCCTGGAGACTCACGCCGTCTCAGTATTCAGCGGTGCATCCAGTCTCTAGTGCATGCTTGTCAGTGCCGCAATGCCAACTGCTCACTTCCATCTTGCCAGAAAATGAAACGTGTAGTTCAACATACCAAAGGCTGCAAGCGCAAAACCAATGGTGGTTGTCCTATTTGCAAGCAGCTCATCGCACTCTGTTGTTACCATGCAAAACACTGCCAAGAGAACAAGTGTCCTGTGCCATTCTGCCTCAATATCAAGCAGAAACTGCGACAACAACAGCTCCAGCACAGGCTACAGCAGGCCCAGATGGTGCGTAGAAGAATGGCCAGCATGCAAAGGACAGGCCAGCAGCTTCCGGGAGGCAATGGTGGGCTGCCATCTCCTGGGAACGGTAGTACTACTGGTCCGAGCACACCAACACCAAGCAGTCAGCCTCCTACCCCACAGCCGCCCACTCAGCTATGCCAGCCTCCAGCAACTCAACCTGGGGTTGGAGGTGTTCCATCAAAGCAGCAACAGCAGATGGCAGGGATGGCCCATCAGTACCAGCAAATGTCTGGAAGTGGTGGGATGATGAACTCCCCGCAACAGCCCATGATCCCACAGCAGCAGCAGCCAACATCGGTTCAGCATCTTCAGCATGCCAACAACCTTCCTCCATATGTGCAAAGACCTCCAGGCTCCTCTCCACTTTCTCAGTCAATGGGAAAGCCAGGCATGGTGCCAGGCGGCTTCCCTCAACAGCAACAGTCGAGCCTAGGACAGCCTGTGATGCCGCAACATCAGCAACCTGGCCCTCCACCTGCTGCAGTAGAAATTGCCATGAAAATTCAACGAGTCGCAGAGTCTCAACGGCAAATGGCTCAGCAAAAGATCTTGCAAAGAAACCAGGCTCCTGGCATGATGCCTCCACATGGCCTGCATCAGGGTCCCCAGACACAAAGCCAGATGAGCATGAACCTTCCTGGAGCTGCAATGGTTGGACCTCAGGGAATTCCATCCCAGACACAAGCAGCAGTGGCACGAACTCACATGGATCAGCAGCAGGGAATGATTACAGCAAGCATGCAGCAGCAGGCAGGAACTCAGTCTCAGCTCCCTCAAGTCCAGTTGCATCAGGCGCAGCAAGGAGCACCTCAACTTCAGGGGACGCCACAGCAGCCGTGGACTGGTCCTGGTATGCCTCCTCAGCAGAGACCTGGGGTAATGAACCAAATAGGTCTGCAAGGAATGGTTGCATCTCAACAGCAGCAGCAGCAGGCAGTTGTTCAACAGCAGCAACAAGGGCATTCAGCGGTAATGGGTATGATGAGTGGCCAAGGAGCGGCTGCACTTGCAGGTGCTGGCCCTGGAAATCACTCTCAGGCTGCCTTACTGGAACTTGTAAGAACCTTAAGGTTACCCAGCTCTCCCCATCAACAACAGCAAGTCCTGAATATACTACGTTCAAACCCTCAGCTCATGGCAACCTTTATCAGGCAACGAGTTCCTAGGTACCTTGGTCGAGGAGGGCCTGGAGCAGGAGGTGTGGGTGTACCAGGAGGACCTGGTGGAGGTCCAGGGCTCATCGATGGCCAGCAAATGAGTGCAAATCCTGCGGCAGCTCAAGGAAGACTCCAAGGTGCTGATGGAGGTCCTGGAGGCGGTGGTCCCCTCCAGCAGCAACAGATGCAATCCGCTCCCATAGGTTCACAACCTCCGGGCATGCTTCAGCAAGCTTTCCAGCAACGGCTCCTTCAGCAGCAACAGTCACACCTAGGAGGAGGATCTCCTGCTCAACACAATCCCATGAGCCCTCAGCAGCCCCAGCAACAGATGTCCCAGTCTCCCCATTTGCAGGGCCAGCAGTTGCCCAATTCCCTAAGCAACCAAGTCCGCTCACCCCAGCCGTCACCTCGGCCCCAGTCCCAGCCACCAAACTCTAGTCCATCTCCTCGCTTGCAGCCCCAGCCATCGCCTCATCACATCTCGCCCCAGACCCAGACGGGGTCGCCTCACCCAGGTCACCTTTCTCAGCATCACAGTGCTGTGCACCCTCCACAGCAACAACCGCAGGCATCCCAACAGCAGCAACAGGCTAATGCGATGGACCAGGGCTCATTTGGAGCAGACCAGAGTGCCATGCTTTCACAGCTAGGTGGGATGGGAGCCTTACATGGGCAAGGGACAAATGACATGCTGACAAATAACCAAGATATGGGGTCGAACATGAATCATTCGTTAGATTTGATGTAATGTTGCAGTGCTCAAAGAACTGTCCTGATTGCCAGAGTTTGGTAGCAGATCTAGGATTTACAAAGGCTGTCATCGATAGTATTATTATTATTACTATTATTATTATTTAATATTTTTCTTATGTAATTGAAAAGAACTGAACTTCCTATGGGAGATACTACATGTGCAAGTCAACAAATTAAGTTAAATGAATGGTAAGTTATTGCTGTTAATATATAAAAATATATAAATATATTTTTTGCCAATTGTGTTCAAAGGGTTTTGGGTTAAGGGATGGGAAATATTTCCTCTTGGTATATGACCAGAAATATTTTTGGGGTGAAGAAGTCTGCCTTTTTTTATAGATATTTTTTAAGATTTTAAAAGTGGCATGAAA

Function

symbol description
ep300a Enables histone acetyltransferase activity. Acts upstream of or within embryonic cranial skeleton morphogenesis; heart looping; and pectoral fin development. Predicted to be located in cytoplasm and nucleus. Predicted to be part of histone acetyltransferase complex and transcription regulator complex. Is expressed in blastoderm; blastomere; brain; intestinal bulb; and liver. Human ortholog(s) of this gene implicated in Rubinstein-Taybi syndrome; colorectal cancer; and congestive heart failure. Orthologous to human EP300 (E1A binding protein p300).

GO:

id name namespace
GO:0000123 histone acetyltransferase complex cellular_component

KEGG:

id description
K04498 EP300, CREBBP, KAT3; E1A/CREB-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_02454392_02493278.mRNA True 7911 mRNA 0.51 32 2454342 2493654

Neighbor

gene id symbol gene type direction distance location
CI01000063_02429298_02443492 CHADLB, CHADL coding upstream 10690 2429298 ~ 2443652 (+)
CI01000063_02426661_02427701 NA coding upstream 26641 2426177 ~ 2427701 (+)
CI01000063_02380854_02399161 NA coding upstream 54763 2380854 ~ 2399579 (+)
CI01000063_02376409_02377664 CSDC2, CSDC2A coding upstream 76652 2376409 ~ 2377690 (+)
CI01000063_02362425_02374879 ACO2 coding upstream 79355 2362425 ~ 2374987 (+)
CI01000063_02509880_02511162 NA coding downstream 16226 2509880 ~ 2511622 (+)
CI01000063_02523431_02524048 NA coding downstream 29777 2523431 ~ 2524245 (+)
CI01000063_02541728_02577373 SHISA8B coding downstream 47250 2540904 ~ 2578385 (+)
CI01000063_02597775_02598565 NA coding downstream 103655 2597309 ~ 2598598 (+)
CI01000063_02637055_02642906 GNA13, GNA13.S, GNA13A coding downstream 142790 2636444 ~ 2644255 (+)
G262442 NA non-coding upstream 74636 2378913 ~ 2379706 (+)
G262651 NA non-coding upstream 126630 2327033 ~ 2327712 (+)
G262352 NA non-coding upstream 136137 2313709 ~ 2318205 (+)
G262439 NA non-coding upstream 151052 2300178 ~ 2303290 (+)
G262625 NA non-coding upstream 206936 2247167 ~ 2247406 (+)
G262671 NA non-coding downstream 7138 2500792 ~ 2563085 (+)
G262443 NA non-coding downstream 97036 2590690 ~ 2592445 (+)
G262422 NA non-coding downstream 126812 2620466 ~ 2623866 (+)
G262726 NA non-coding downstream 134415 2628069 ~ 2628966 (+)
G262728 NA non-coding downstream 139517 2633171 ~ 2633711 (+)
G262423 NA other upstream 211377 2241408 ~ 2242965 (+)
G262194 NA other upstream 1309335 1139352 ~ 1145007 (+)
G262060 NA other upstream 1743788 710110 ~ 710554 (+)
G261984 NA other upstream 1786960 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 1896008 533801 ~ 558334 (+)
G262436 NA other downstream 219961 2713615 ~ 2714517 (+)
G265391 NA other downstream 3420129 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3841624 6335618 ~ 6338283 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005306 ep300a coding NC_007123.7 CM002896.2 18927065 ~ 18961491 (-)
bowfin (Amia calva) AMCG00015019 ep300,LOC100700725,LOC106607167 coding CM030128.1 CM030128.1 42273711 ~ 42303298 (+)