| Item | Value |
|---|---|
| gene id | XLOC_005306 |
| gene name | ep300a |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 18927065 ~ 18961491 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| ep300a | Enables histone acetyltransferase activity. Acts upstream of or within embryonic cranial skeleton morphogenesis; heart looping; and pectoral fin development. Predicted to be located in cytoplasm and nucleus. Predicted to be part of histone acetyltransferase complex and transcription regulator complex. Is expressed in blastoderm; blastomere; brain; intestinal bulb; and liver. Human ortholog(s) of this gene implicated in Rubinstein-Taybi syndrome; colorectal cancer; and congestive heart failure. Orthologous to human EP300 (E1A binding protein p300). |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0016573 | histone acetylation | biological_process |
| GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
| GO:0033339 | pectoral fin development | biological_process |
| GO:0048701 | embryonic cranial skeleton morphogenesis | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0000123 | histone acetyltransferase complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005667 | transcription regulator complex | cellular_component |
| GO:0031490 | chromatin DNA binding | molecular_function |
| GO:0016740 | transferase activity | molecular_function |
| GO:0016746 | transferase activity, transferring acyl groups | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003712 | transcription coregulator activity | molecular_function |
| GO:0003713 | transcription coactivator activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0001085 | RNA polymerase II transcription factor binding | molecular_function |
| GO:0004402 | histone acetyltransferase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-080403-16 | Enables histone acetyltransferase activity. Acts upstream of or within embryonic cranial skeleton morphogenesis; heart looping; and pectoral fin development. Predicted to be located in cytoplasm and nucleus. Predicted to be part of histone acetyltransferase complex and transcription regulator complex. Is expressed in blastoderm; blastomere; brain; intestinal bulb; and liver. Human ortholog(s) of this gene implicated in Rubinstein-Taybi syndrome; colorectal cancer; and congestive heart failure. Orthologous to human EP300 (E1A binding protein p300). |
| ensembl_id | ENSDARG00000100666 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00010189 | False | 10239 | mRNA | 0.48 | 31 | 18927065 | 18961491 |
| TCONS_00010190 | True | 8016 | mRNA | 0.52 | 31 | 18929062 | 18961289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_005305 | desi1b | coding | downstream | 28590 | 18895657 ~ 18898475 (-) |
| XLOC_005304 | shisa8b | coding | downstream | 43986 | 18792315 ~ 18883079 (-) |
| XLOC_005303 | AL772266.1 | coding | downstream | 188536 | 18738413 ~ 18738529 (-) |
| XLOC_005302 | zdhhc4 | coding | downstream | 348633 | 18571455 ~ 18578432 (-) |
| XLOC_005301 | pgp | coding | downstream | 358231 | 18565553 ~ 18568834 (-) |
| XLOC_005307 | chadlb | coding | upstream | 27995 | 18989486 ~ 19007834 (-) |
| XLOC_005308 | rangap1b | coding | upstream | 46435 | 19007926 ~ 19028068 (-) |
| XLOC_005309 | si:ch73-139e5.4 | coding | upstream | 104188 | 19065679 ~ 19091214 (-) |
| XLOC_005310 | csdc2a | coding | upstream | 137773 | 19099264 ~ 19103490 (-) |
| XLOC_005311 | aco2 | coding | upstream | 145080 | 19106571 ~ 19119176 (-) |
| XLOC_005298 | NA | non-coding | downstream | 472658 | 18453207 ~ 18454407 (-) |
| XLOC_005295 | NA | non-coding | downstream | 699335 | 18224534 ~ 18227730 (-) |
| XLOC_005291 | NA | non-coding | downstream | 1199525 | 17721801 ~ 17727540 (-) |
| XLOC_005289 | dre-mir-2192 | non-coding | downstream | 1220164 | 17706792 ~ 17706901 (-) |
| XLOC_005318 | NA | non-coding | upstream | 1095480 | 20056971 ~ 20120711 (-) |
| XLOC_005319 | CR352324.1 | non-coding | upstream | 1227678 | 20189169 ~ 20189286 (-) |
| XLOC_005321 | NA | non-coding | upstream | 1353504 | 20314995 ~ 20334709 (-) |
| XLOC_005327 | SLC16A6 | non-coding | upstream | 1614149 | 20575640 ~ 20584439 (-) |
| XLOC_005332 | CR753823.1 | non-coding | upstream | 2608292 | 21569783 ~ 21569899 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000063_02454392_02493278 | EP300A | coding | CI01000063 | null | 2454342 ~ 2493654 (+) |