CI01000063_02697497_02705829


Basic Information

Item Value
gene id CI01000063_02697497_02705829
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2697376 ~ 2705865 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_02697497_02705829.mRNA
ACATAAATGAAAGTGAAAGAACACAGGCTAACTCAAAAGCAAAATCAACCATGCACTAGCGTTTTACTAAAATAAACTTTTGACGAATTGAAAGGTGACTCTGTCCCCCATAAATCTCGGGATGAATGACGGAACGGAGGAAGAGACGGTTCCCGTTGTAATGGAGACCTCGTCATACTCGCAGGTGGTTTTCAACGATGTTCCTCCATCATATACGCCAAACACCCCAGTTTCGTGCCGGTACACTCTCACCGGTGCTCTGCAGCCCAACCCGAGGGACTGGGTCGGTATCTTCAAGGTTGGATGGAGTTCGACACAGCAGTATTTTAACTATGTATGGGTGGAACCTTACCTGGACAATGCTGGACCTGAACCGCTTGTGCAACAAGTGGTTTTCAAAGAGAGCTACCTGCCCAAGGATGATGGGGAGTTTTACCAGTTCTGCTATGTGGACAGCAATGGTTATGTTAAAGGAGCCAGCACCCCATTCTGCTTTCAAAACCCAGCAGAAACAAGCCTTGACTGCAGCTTGGAGAAGGACCTGTTAGTTATAACAACACAGGAGCAGGCAGAAAAGATGGAGAAAGAGATAGAGGACTATGTCAAAGAGATTGAGCACTTAAAAGAAACAAATAAGATCCTGAAAACTGAGTTGGATGAAAGACTGCACGAGATCCGCCGTCTCAGGAGCTCTCTAGATGATGTAAAGCCAAAGGATAAACCGGAAACACCACTGCCAGATGTACAGAGTTTTAACTTCACTGAAGAGGTGGATGTGCAAAGCAGCAGGAAAGACAATGAGAAATTGCAGATTGAAATCCAGGAGCTCAGGATGAAAAAGACTATGGAGGACCGGAGTGCTGAAAACAAAGCATTTCAAACATCCATGTCAGAGCAAGGAGCACAAGAGAAAGAGCAAAAGAAAGTACAGATTCAGGCTCTGCTAACTCAGCTGACAGAAGCCAGAGGGCTGCTTCGCAGCGAGGTGCAGAATTGTAAAGAAGCCTACAAGCGTGCAGAAGGAGCTGAGCAGGAATTGAAGGAAGTGAAAAAGAAGCTGGAGGAGATGACCTTAAAACAGGCTGAGGGCGAGAAAACCAATCAAATCCGGAAACAACTTCAGCAGGCACAAGACAAAATTTACGAAATGGCAGAGACATCAAGATTAGACAGAGAGACGCTTGAGAAAAGGAATGAGGTCGCATCTGTTGCAGCAATGTCTGATCAACTACCCAACCCTCAAAGCCCACCCGCCTCCCAGGAGCAAACATACCCACCTGACTCTCATTTTTATGAGAGCATTGATGATTTGACAGCAAATCCTGCAGAAGCAGAGATTAGGGTGTGTCGGCACTGTCAGGAGAAATTTCCTGGCATCAGCGAGGATGAATTGGAACAACACGAGCAGTCTCACAAAGTTTGTCCTTTCTGCACTCTGGTCTTTGACGACTGGGAACAGCAGGCATTTGAAGATCATGTTTACAGTCATGAGGATTAGTCAGTTCTGATTTCTAAATATGATATAATGTATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_02697497_02705829.mRNA True 1534 mRNA 0.45 11 2697376 2705865

Neighbor

gene id symbol gene type direction distance location
CI01000063_02691683_02695421 STX4 coding upstream 1848 2691683 ~ 2695528 (+)
CI01000063_02683852_02690204 NA coding upstream 6861 2683441 ~ 2690515 (+)
CI01000063_02666157_02672420 ARSG coding upstream 24956 2665215 ~ 2672420 (+)
CI01000063_02654022_02654466 NA coding upstream 42738 2654022 ~ 2654638 (+)
CI01000063_02647329_02647886 AMZ2 coding upstream 49344 2647329 ~ 2648032 (+)
CI01000063_02744075_02750377 ST6GALNAC1.1 coding downstream 38210 2744075 ~ 2750586 (+)
CI01000063_02757057_02761321 NA coding downstream 50927 2756792 ~ 2761514 (+)
CI01000063_02788126_02820510 CASKIN2 coding downstream 82261 2788126 ~ 2820588 (+)
CI01000063_03135170_03135337 NA coding downstream 429273 3135138 ~ 3135403 (+)
CI01000063_03213632_03233822 CAR10, CA10 coding downstream 507767 3213632 ~ 3234293 (+)
G262728 NA non-coding upstream 63665 2633171 ~ 2633711 (+)
G262726 NA non-coding upstream 68410 2628069 ~ 2628966 (+)
G262422 NA non-coding upstream 73510 2620466 ~ 2623866 (+)
G262443 NA non-coding upstream 104931 2590690 ~ 2592445 (+)
G262671 NA non-coding upstream 134291 2500792 ~ 2563085 (+)
G262413 NA non-coding downstream 12993 2718858 ~ 2719317 (+)
G263552 NA non-coding downstream 120945 2826810 ~ 2827031 (+)
G263588 NA non-coding downstream 161657 2867522 ~ 2867784 (+)
G263611 NA non-coding downstream 182070 2887935 ~ 2888140 (+)
G262423 NA other upstream 454411 2241408 ~ 2242965 (+)
G262194 NA other upstream 1552369 1139352 ~ 1145007 (+)
G262060 NA other upstream 1986822 710110 ~ 710554 (+)
G261984 NA other upstream 2029994 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 2139042 533801 ~ 558334 (+)
G262436 NA other downstream 7750 2713615 ~ 2714517 (+)
G265391 NA other downstream 3207918 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 3629413 6335618 ~ 6338283 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location