CI01000063_07197046_07197411


Basic Information

Item Value
gene id CI01000063_07197046_07197411
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7196642 ~ 7197504 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_07197046_07197411.mRNA
TTATATAAGAGACAGCTGCTGTTCTCTTGTCCCTTGAATTTAATCTTTGAAGCAGCATGCGACCCCCACCACAACAACTCTTCTCACACTTTCTAAATGAGTTTCTGTGCAACTTTACATTTGTTTGCTGTTAAACACCAGCTGCTTCTGTACTGCCGACAATCCTTTAAAGCTTAACACACACATCCTTCAACGGCAAAAAATTATTTTTCTGGAAAGCTCTTCATGCCCACTGTACTCACTTTGACTCACTCTTTTCAAGCTAACCTCCTTTACAAACATACTACTGTGAACAAAGCCTGAAAGGAGAAAATGTGTGTCCCACTTGTTAAAGCTTCAAGCCATGTCTGAAACGTGCAGCTTTCACGCTAACTTTCATTAGCTTTGCACTGACTATTCAGGAAATGAGAGCCAGGTGTAAATCTCAGAGCTCGCCAGATGACGAAAAGAAAAAGGAGGCATGTTTTGACGATTGTGTTTCAGAGGTCAACGGTAAAGTGACTAGACAAGGCCCTGAGCCAATCTCTAACTCATCTGAGCTTTTAGCACATGGTTCTGATCCCAATATGATGTCACTGAGCAGTAGCAGAGGACATGACGGCCAACTCAAGAAGAAAAAAAAGCAGACAAAAAGACAAGACCAGCCAAACAGAGTCAGACGTTACTCAGCAAGCTATTTCAAGAAGTGATCTCCATCAGGGTAAAAAGAGGGCAGGGATGGAAAGTACAAAAACAGACGAGAAAGAGAAAGAAGTACAGTTAATGAGGTAATTGGCTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_07197046_07197411.mRNA True 782 mRNA 0.42 2 7196642 7197504

Neighbor

gene id symbol gene type direction distance location
CI01000063_07120937_07121851 CDK5R1B, CDK5R1 coding upstream 73336 7120602 ~ 7125013 (+)
CI01000063_07079516_07080598 UTS2R coding upstream 115293 7079183 ~ 7081349 (+)
CI01000063_07012391_07014164 NA coding upstream 180267 7012225 ~ 7016375 (+)
CI01000063_06990713_06993818 NA coding upstream 202790 6990640 ~ 6993852 (+)
CI01000063_06982270_06983358 UTS2R coding upstream 213187 6981946 ~ 6983455 (+)
CI01000063_07199941_07203985 NA coding downstream 1593 7199097 ~ 7204038 (+)
CI01000063_07252228_07279272 TBKBP1 coding downstream 54546 7252050 ~ 7280398 (+)
CI01000063_07335335_07350224 TBX21 coding downstream 137831 7335335 ~ 7350224 (+)
CI01000063_07372666_07374936 PNPO coding downstream 175162 7372666 ~ 7374961 (+)
CI01000063_07382284_07388874 CDK5RAP3 coding downstream 184780 7382284 ~ 7388915 (+)
G266171 NA non-coding upstream 47251 7128316 ~ 7149391 (+)
G266208 NA non-coding upstream 79325 7115037 ~ 7117317 (+)
G266299 NA non-coding upstream 170353 7026047 ~ 7026289 (+)
G266294 NA non-coding upstream 175133 7021305 ~ 7021509 (+)
G266375 NA non-coding downstream 17336 7214840 ~ 7215096 (+)
G266213 NA non-coding downstream 25135 7222639 ~ 7223196 (+)
G266383 NA non-coding downstream 91983 7289487 ~ 7290047 (+)
G266385 NA non-coding downstream 93985 7291489 ~ 7291743 (+)
G266393 NA non-coding downstream 154314 7351818 ~ 7352187 (+)
CI01000063_06335618_06338138 HOXB8B other upstream 859282 6335618 ~ 6338283 (+)
G265391 NA other upstream 1277613 5913783 ~ 5919029 (+)
G262436 NA other upstream 4482125 2713615 ~ 2714517 (+)
G262423 NA other upstream 4953677 2241408 ~ 2242965 (+)
G262194 NA other upstream 6051635 1139352 ~ 1145007 (+)

Expression


Co-expression Network