G266393


Basic Information

Item Value
gene id G266393
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7351818 ~ 7352187 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU302356
ATGACATTATTTTCATTTTTGGGTGAACTAACACTTTAAGCATGTACTGATCTTCAAACTGGCTTCAGCAATAGTTGCTGTAACATAGCTGTTTTTTCAGATTGTTAAAAAAAAAACTTTATGTACAATAATACAATGTTGTCTCATTGTAAACAACATTAGAAATTTTCATATTAAACAGATTTATTTAAACAGGCTAATGTTGCATGCACTTGTGTGCTGCATAACAATTTAGCACAATGAGTTAATACATTGTGCATTCAAATATGAGCCTTACAGTACAACATTTGTGTGTCCAGTCAATCCCAAAATGCACCCCTACAGGGAGCACAATCAATAAGCACATTAAACCCTAGGCCACTCAGACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302356 True 370 lncRNA 0.34 1 7351818 7352187

Neighbor

gene id symbol gene type direction distance location
CI01000063_07335335_07350224 TBX21 coding upstream 1594 7335335 ~ 7350224 (+)
CI01000063_07252228_07279272 TBKBP1 coding upstream 71420 7252050 ~ 7280398 (+)
CI01000063_07199941_07203985 NA coding upstream 147780 7199097 ~ 7204038 (+)
CI01000063_07197046_07197411 NA coding upstream 154314 7196642 ~ 7197504 (+)
CI01000063_07120937_07121851 CDK5R1B, CDK5R1 coding upstream 228512 7120602 ~ 7125013 (+)
CI01000063_07372666_07374936 PNPO coding downstream 20479 7372666 ~ 7374961 (+)
CI01000063_07382284_07388874 CDK5RAP3 coding downstream 30097 7382284 ~ 7388915 (+)
CI01000063_07400153_07405739 NFE2L1B, NFE2L1 coding downstream 47966 7400153 ~ 7406600 (+)
CI01000063_07420519_07423734 PHKG2 coding downstream 68219 7420406 ~ 7423976 (+)
CI01000063_07429231_07440299 RNF40 coding downstream 76144 7428331 ~ 7441051 (+)
G266385 NA non-coding upstream 60075 7291489 ~ 7291743 (+)
G266383 NA non-coding upstream 61771 7289487 ~ 7290047 (+)
G266213 NA non-coding upstream 128622 7222639 ~ 7223196 (+)
G266375 NA non-coding upstream 136722 7214840 ~ 7215096 (+)
G266171 NA non-coding upstream 202427 7128316 ~ 7149391 (+)
G266229 NA non-coding downstream 3193 7355380 ~ 7358646 (+)
CI01000063_07447683_07448277 NA non-coding downstream 90864 7447066 ~ 7448441 (+)
G266195 NA non-coding downstream 112284 7464471 ~ 7467184 (+)
G266408 NA non-coding downstream 135399 7487586 ~ 7487807 (+)
G266224 NA non-coding downstream 138122 7490309 ~ 7490807 (+)
CI01000063_06335618_06338138 HOXB8B other upstream 1014458 6335618 ~ 6338283 (+)
G265391 NA other upstream 1432789 5913783 ~ 5919029 (+)
G262436 NA other upstream 4637301 2713615 ~ 2714517 (+)
G262423 NA other upstream 5108853 2241408 ~ 2242965 (+)
G262194 NA other upstream 6206811 1139352 ~ 1145007 (+)

Expression


Co-expression Network