RNA id: TU302356


Basic Information

Item Value
RNA id TU302356
length 370
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G266393
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7351818 ~ 7352187 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGACATTATTTTCATTTTTGGGTGAACTAACACTTTAAGCATGTACTGATCTTCAAACTGGCTTCAGCAATAGTTGCTGTAACATAGCTGTTTTTTCAGATTGTTAAAAAAAAAACTTTATGTACAATAATACAATGTTGTCTCATTGTAAACAACATTAGAAATTTTCATATTAAACAGATTTATTTAAACAGGCTAATGTTGCATGCACTTGTGTGCTGCATAACAATTTAGCACAATGAGTTAATACATTGTGCATTCAAATATGAGCCTTACAGTACAACATTTGTGTGTCCAGTCAATCCCAAAATGCACCCCTACAGGGAGCACAATCAATAAGCACATTAAACCCTAGGCCACTCAGACAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302348 lncRNA upstream 60075 7291489 ~ 7291743 (+) True G266385
TU302346 lncRNA upstream 61771 7289487 ~ 7290047 (+) False G266383
TU302345 lncRNA upstream 61771 7289720 ~ 7290047 (+) True G266383
TU302341 lncRNA upstream 61806 7289487 ~ 7290012 (+) False G266383
TU302342 lncRNA upstream 61806 7289626 ~ 7290012 (+) False G266383
TU302173 lncRNA downstream 3193 7355380 ~ 7358646 (+) True G266229
TU302102 lncRNA downstream 90864 7443051 ~ 7446972 (+) True G266165
TU302139 lncRNA downstream 112284 7464471 ~ 7467184 (+) True G266195
TU302371 lncRNA downstream 135399 7487586 ~ 7487807 (+) True G266408
TU302168 lncRNA downstream 138122 7490309 ~ 7490807 (+) True G266224
CI01000063_07335335_07350224.mRNA mRNA upstream 1594 7335335 ~ 7350224 (+) True CI01000063_07335335_07350224
CI01000063_07252228_07279272.mRNA mRNA upstream 71420 7252050 ~ 7280398 (+) True CI01000063_07252228_07279272
CI01000063_07199941_07203985.mRNA mRNA upstream 147780 7199097 ~ 7204038 (+) True CI01000063_07199941_07203985
CI01000063_07197046_07197411.mRNA mRNA upstream 154314 7196642 ~ 7197504 (+) True CI01000063_07197046_07197411
CI01000063_07120937_07121851.mRNA mRNA upstream 228512 7120602 ~ 7123306 (+) False CI01000063_07120937_07121851
CI01000063_07372666_07374936.mRNA mRNA downstream 20479 7372666 ~ 7374961 (+) True CI01000063_07372666_07374936
CI01000063_07382284_07388874.mRNA mRNA downstream 30097 7382284 ~ 7388915 (+) True CI01000063_07382284_07388874
CI01000063_07400153_07405739.mRNA mRNA downstream 47966 7400153 ~ 7406600 (+) True CI01000063_07400153_07405739
CI01000063_07420519_07423734.mRNA mRNA downstream 68219 7420406 ~ 7423976 (+) True CI01000063_07420519_07423734
CI01000063_07429231_07440299.mRNA mRNA downstream 76144 7428331 ~ 7441051 (+) True CI01000063_07429231_07440299
TU301297 other upstream 1014458 6335278 ~ 6335601 (+) True G265462
TU301223 other upstream 1432789 5913783 ~ 5919029 (+) True G265391
TU297890 other upstream 4637301 2713615 ~ 2714517 (+) True G262436
TU297877 other upstream 5108853 2241408 ~ 2242965 (+) True G262423
TU297621 other upstream 6206811 1143871 ~ 1145007 (+) True G262194

Expression Profile