G263819


Basic Information

Item Value
gene id G263819
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 3356245 ~ 3356507 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU299441
CTTATTGTTTGGAATATTCCTATACAGCCATTGATAAACACTCTGAGGGTCAGGGAGTGCATTACAGTTGAGACGGGGCTGGTTTGAAATGTTTTTCAGTGTGGTCATGCAGTTTTATTCAAATTAGGCTTGTATTTCTATTTGAGAGTGCAGAAAAATATTCTCTTCAGCAATCTAAGCCCAAGTAGGTGGCCTCTTTCTTATTTTCATCCTCTTTTGAAATCTACCACTGAAAGCAGCTCTGGAACATGTTTTACTCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299441 True 263 lncRNA 0.39 1 3356245 3356507

Neighbor

gene id symbol gene type direction distance location
CI01000063_03333320_03353312 NA coding upstream 2660 3333320 ~ 3353585 (+)
CI01000063_03315604_03323945 NA coding upstream 32300 3315604 ~ 3323945 (+)
CI01000063_03307922_03312636 NA coding upstream 43438 3307922 ~ 3312807 (+)
CI01000063_03213632_03233822 CAR10, CA10 coding upstream 121952 3213632 ~ 3234293 (+)
CI01000063_03135170_03135337 NA coding upstream 220842 3135138 ~ 3135403 (+)
CI01000063_03369570_03370696 NA coding downstream 12701 3369026 ~ 3372142 (+)
CI01000063_03649864_03661903 WNT3 coding downstream 293357 3649864 ~ 3661939 (+)
CI01000063_03722032_03737642 HDLBP, HDLBPB coding downstream 363871 3720378 ~ 3737930 (+)
CI01000063_03808559_03820963 POLR2A coding downstream 451768 3808275 ~ 3821730 (+)
CI01000063_03832086_03844644 CAPGB coding downstream 475579 3832086 ~ 3844644 (+)
G263806 NA non-coding upstream 66400 3289508 ~ 3289845 (+)
G263805 NA non-coding upstream 66882 3288904 ~ 3289363 (+)
G263800 NA non-coding upstream 83633 3272190 ~ 3272612 (+)
G263771 NA non-coding upstream 168542 3185136 ~ 3187703 (+)
G263671 NA non-coding upstream 212069 3062341 ~ 3144176 (+)
G263825 NA non-coding downstream 4684 3361191 ~ 3361417 (+)
G263827 NA non-coding downstream 5933 3362440 ~ 3368504 (+)
G263830 NA non-coding downstream 26347 3382854 ~ 3389886 (+)
G263843 NA non-coding downstream 41746 3398253 ~ 3398457 (+)
G262436 NA other upstream 641728 2713615 ~ 2714517 (+)
G262423 NA other upstream 1113280 2241408 ~ 2242965 (+)
G262194 NA other upstream 2211238 1139352 ~ 1145007 (+)
G262060 NA other upstream 2645691 710110 ~ 710554 (+)
G261984 NA other upstream 2688863 665800 ~ 667382 (+)
G265391 NA other downstream 2557276 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 2978771 6335618 ~ 6338283 (+)

Expression


Co-expression Network