Gene
RNA
| Item | Value |
|---|---|
| gene id | G273278 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000069 |
| NCBI id | null |
| chromosome length | 5329268 |
| location | 170902 ~ 171320 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU310111 | True | 419 | lncRNA | 0.41 | 1 | 170902 | 171320 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000069_00147622_00154047 | NA | coding | upstream | 16834 | 147507 ~ 154068 (+) |
| CI01000069_00091982_00141515 | RHOT1, RHOT1A | coding | upstream | 28586 | 91674 ~ 142316 (+) |
| CI01000069_00075784_00090901 | ATAD5 | coding | upstream | 79806 | 75394 ~ 91096 (+) |
| CI01000069_00066477_00068981 | NUDT9 | coding | upstream | 101553 | 66060 ~ 69349 (+) |
| CI01000069_00016660_00026781 | ATP2A1L, ATP2A1 | coding | upstream | 144068 | 16315 ~ 26834 (+) |
| CI01000069_00246608_00247385 | NA | coding | downstream | 75191 | 246511 ~ 248179 (+) |
| CI01000069_00357901_00365747 | NA | coding | downstream | 186581 | 357901 ~ 366519 (+) |
| CI01000069_00403871_00404476 | SOCS1A | coding | downstream | 232286 | 403606 ~ 404493 (+) |
| CI01000069_00575065_00578555 | EMP2 | coding | downstream | 403745 | 575065 ~ 578643 (+) |
| CI01000069_00596413_00741443 | GRIN2A | coding | downstream | 425093 | 596413 ~ 741443 (+) |
| G273265 | NA | non-coding | upstream | 41588 | 129094 ~ 129314 (+) |
| G273257 | NA | non-coding | upstream | 115945 | 54579 ~ 54957 (+) |
| G273256 | NA | non-coding | upstream | 116356 | 54343 ~ 54546 (+) |
| G273255 | NA | non-coding | upstream | 116954 | 53741 ~ 53948 (+) |
| G273254 | NA | non-coding | upstream | 117404 | 53293 ~ 53498 (+) |
| G273281 | NA | non-coding | downstream | 1992 | 173312 ~ 173529 (+) |
| G273282 | NA | non-coding | downstream | 2391 | 173711 ~ 174053 (+) |
| G273284 | NA | non-coding | downstream | 4678 | 175998 ~ 266154 (+) |
| G273333 | NA | non-coding | downstream | 120865 | 292185 ~ 292397 (+) |
| G273338 | NA | non-coding | downstream | 160718 | 332038 ~ 332312 (+) |
| G273359 | NA | other | downstream | 306407 | 477727 ~ 479081 (+) |
| CI01000069_02033431_02040119 | EIF3D.S, EIF3D | other | downstream | 1862080 | 2031954 ~ 2040427 (+) |
| G274270 | NA | other | downstream | 2501304 | 2672624 ~ 2681158 (+) |
| CI01000069_02894136_02894807 | COX6A2 | other | downstream | 2721526 | 2893418 ~ 2894947 (+) |
