G273284


Basic Information

Item Value
gene id G273284
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 175998 ~ 266154 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU310117
ATTTATTACTCACCCTCATGTCGTTCCACACCCATAAGACCTTCGTTAGTCTTCGGAACACAAATTAAGATATTTTTGTTGAAATCCGATGGCTCAGTGAGGCCAGCATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCACGTGAGTACAGTGGTTCAATATTAATATTATAAAGTGACGAGAATATTTTTGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310117 True 230 lncRNA 0.36 2 175998 266154

Neighbor

gene id symbol gene type direction distance location
CI01000069_00147622_00154047 NA coding upstream 21930 147507 ~ 154068 (+)
CI01000069_00091982_00141515 RHOT1, RHOT1A coding upstream 33682 91674 ~ 142316 (+)
CI01000069_00075784_00090901 ATAD5 coding upstream 84902 75394 ~ 91096 (+)
CI01000069_00066477_00068981 NUDT9 coding upstream 106649 66060 ~ 69349 (+)
CI01000069_00016660_00026781 ATP2A1L, ATP2A1 coding upstream 149164 16315 ~ 26834 (+)
CI01000069_00357901_00365747 NA coding downstream 91747 357901 ~ 366519 (+)
CI01000069_00403871_00404476 SOCS1A coding downstream 137452 403606 ~ 404493 (+)
CI01000069_00575065_00578555 EMP2 coding downstream 308911 575065 ~ 578643 (+)
CI01000069_00596413_00741443 GRIN2A coding downstream 330259 596413 ~ 741443 (+)
CI01000069_00743257_00745220 NA coding downstream 477028 743182 ~ 746071 (+)
G273282 NA non-coding upstream 1945 173711 ~ 174053 (+)
G273281 NA non-coding upstream 2469 173312 ~ 173529 (+)
G273278 NA non-coding upstream 4678 170902 ~ 171320 (+)
G273265 NA non-coding upstream 46684 129094 ~ 129314 (+)
G273257 NA non-coding upstream 121041 54579 ~ 54957 (+)
G273333 NA non-coding downstream 26031 292185 ~ 292397 (+)
G273338 NA non-coding downstream 65884 332038 ~ 332312 (+)
G273400 NA non-coding downstream 192643 458797 ~ 460096 (+)
G273401 NA non-coding downstream 216660 482814 ~ 483227 (+)
G273407 NA non-coding downstream 237492 503646 ~ 504146 (+)
G273359 NA other downstream 211573 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 1767246 2031954 ~ 2040427 (+)
G274270 NA other downstream 2406470 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 2626692 2893418 ~ 2894947 (+)

Expression


Co-expression Network